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The map label for this gene is rhtA [H]

Identifier: 120611621

GI number: 120611621

Start: 3247491

End: 3248402

Strand: Reverse

Name: rhtA [H]

Synonym: Aave_2958

Alternate gene names: 120611621

Gene position: 3248402-3247491 (Counterclockwise)

Preceding gene: 120611622

Following gene: 120611619

Centisome position: 60.69

GC content: 70.83

Gene sequence:

>912_bases
ATGTCCACATCGCATGATTCACCGCTGATACCGGCCCTCGCCATCCTGGGATCCGTGACTTTCCTCGGGATCGGCACGTC
CTGGGCCAAGCATTCCCTGTTCCCGCTGGTCGGTGCCCAGGGCACCACGGCCCTGCGCGTGGGCTTCTCGGCCCTGTTGC
TGCTGCTCCTGTGGCGTCCCTGGCGGCGGCCGCTCGCACGGGCCGATGCGGCACGCATCGCCGCCTACGGCGCCGCCCTG
GGCGCGATGAACCTCTGCTTCTACCTGTCGCTGCAGACCATTCCCTTCGGCGTGGCCGTGGCGATCGAGTTCTCCGGCCC
GCTGGCGGTGGCGCTGCTGTCGTCCCGCCGTCCACTGGATTTCATCTGGGTGGTCCTGGCGGTCGCGGGGCTGGGCCTGC
TGCTGCCCTGGCAGCAGAATGCCGGAATGCTCGACCTCCGGGGCGTGATCTTCGCGCTGGCGGCCGCCGTGTTCTGGGCG
GGCTACATCCTGTTCGGCAAGCGCCTGGGACACCTGCACGCCGGGCATTCCGTGCCCCTCGGGCTGGCCGCGGCATCGCT
GGTCGTGGTGCCCGTGGGCATCGGGCATGCCGGGGCCGGCCTGCTGGCACCGGGCGTGCTGCTCACCGGCATCGGCGTGG
CCGCATTGTCCAGCGCCGTGCCGATCATGCTGGAAATGGTGGCGCTCAAGCGCCTGCCCCAGCAGGCCTTCGGCATCATG
ATCAGCATGGAGCCCGCCGTCGCCGCACTGCTGGCACTGGTACTGCTCGGCGAGTACCTGAGTCCGGCCCAGTGGCTGGC
CATCGGCATGATCGTCTCAGCCTCCATGGGATGCGCCTTCACCGCACCGCGCCGGTCCCCGCAGCCGCCGCCCGTGCCGC
CCGCGGATGCGGGCGCGGCCTCGCGCGGCTGA

Upstream 100 bases:

>100_bases
CGACTACCTGCCCGATACCGCCATGGGCGTGCAGCCCCACCTGCGCCGCATGCTGCAGGCCTGCCTGGACTTCGCCGCAG
AGCGCGCGGCGGCCTGAGCG

Downstream 100 bases:

>100_bases
CCGGTCCGCCCCTGACAACCGGGGGGCCGGCGCCACGAAAAAGGGCGGCCCGCCGGCCGCCCTTCGCATGCACCGGCCGG
GCCTTCAGGCTGCGGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSTSHDSPLIPALAILGSVTFLGIGTSWAKHSLFPLVGAQGTTALRVGFSALLLLLLWRPWRRPLARADAARIAAYGAAL
GAMNLCFYLSLQTIPFGVAVAIEFSGPLAVALLSSRRPLDFIWVVLAVAGLGLLLPWQQNAGMLDLRGVIFALAAAVFWA
GYILFGKRLGHLHAGHSVPLGLAAASLVVVPVGIGHAGAGLLAPGVLLTGIGVAALSSAVPIMLEMVALKRLPQQAFGIM
ISMEPAVAALLALVLLGEYLSPAQWLAIGMIVSASMGCAFTAPRRSPQPPPVPPADAGAASRG

Sequences:

>Translated_303_residues
MSTSHDSPLIPALAILGSVTFLGIGTSWAKHSLFPLVGAQGTTALRVGFSALLLLLLWRPWRRPLARADAARIAAYGAAL
GAMNLCFYLSLQTIPFGVAVAIEFSGPLAVALLSSRRPLDFIWVVLAVAGLGLLLPWQQNAGMLDLRGVIFALAAAVFWA
GYILFGKRLGHLHAGHSVPLGLAAASLVVVPVGIGHAGAGLLAPGVLLTGIGVAALSSAVPIMLEMVALKRLPQQAFGIM
ISMEPAVAALLALVLLGEYLSPAQWLAIGMIVSASMGCAFTAPRRSPQPPPVPPADAGAASRG
>Mature_302_residues
STSHDSPLIPALAILGSVTFLGIGTSWAKHSLFPLVGAQGTTALRVGFSALLLLLLWRPWRRPLARADAARIAAYGAALG
AMNLCFYLSLQTIPFGVAVAIEFSGPLAVALLSSRRPLDFIWVVLAVAGLGLLLPWQQNAGMLDLRGVIFALAAAVFWAG
YILFGKRLGHLHAGHSVPLGLAAASLVVVPVGIGHAGAGLLAPGVLLTGIGVAALSSAVPIMLEMVALKRLPQQAFGIMI
SMEPAVAALLALVLLGEYLSPAQWLAIGMIVSASMGCAFTAPRRSPQPPPVPPADAGAASRG

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=262, Percent_Identity=51.1450381679389, Blast_Score=237, Evalue=7e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31221; Mature: 31089

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSHDSPLIPALAILGSVTFLGIGTSWAKHSLFPLVGAQGTTALRVGFSALLLLLLWRP
CCCCCCCCHHHHHHHHHHHHHEECCCHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
WRRPLARADAARIAAYGAALGAMNLCFYLSLQTIPFGVAVAIEFSGPLAVALLSSRRPLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCEEEHHHHCCCCHH
FIWVVLAVAGLGLLLPWQQNAGMLDLRGVIFALAAAVFWAGYILFGKRLGHLHAGHSVPL
HHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
GLAAASLVVVPVGIGHAGAGLLAPGVLLTGIGVAALSSAVPIMLEMVALKRLPQQAFGIM
HHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCEE
ISMEPAVAALLALVLLGEYLSPAQWLAIGMIVSASMGCAFTAPRRSPQPPPVPPADAGAA
EECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCC
SRG
CCC
>Mature Secondary Structure 
STSHDSPLIPALAILGSVTFLGIGTSWAKHSLFPLVGAQGTTALRVGFSALLLLLLWRP
CCCCCCCHHHHHHHHHHHHHEECCCHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
WRRPLARADAARIAAYGAALGAMNLCFYLSLQTIPFGVAVAIEFSGPLAVALLSSRRPLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCEEEHHHHCCCCHH
FIWVVLAVAGLGLLLPWQQNAGMLDLRGVIFALAAAVFWAGYILFGKRLGHLHAGHSVPL
HHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
GLAAASLVVVPVGIGHAGAGLLAPGVLLTGIGVAALSSAVPIMLEMVALKRLPQQAFGIM
HHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCEE
ISMEPAVAALLALVLLGEYLSPAQWLAIGMIVSASMGCAFTAPRRSPQPPPVPPADAGAA
EECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCC
SRG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]