| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611606
Identifier: 120611606
GI number: 120611606
Start: 3234049
End: 3234288
Strand: Reverse
Name: 120611606
Synonym: Aave_2943
Alternate gene names: NA
Gene position: 3234288-3234049 (Counterclockwise)
Preceding gene: 120611608
Following gene: 120611605
Centisome position: 60.42
GC content: 63.75
Gene sequence:
>240_bases ATGAATACCGTGCGTTGGAACATCGCCGTGTCGCCGGACGTGGATCAGTCCGTGCGCATGTTCATTGCCGCCCAAGGCGG CGGCCGCAAGGGCGACCTGTCGCGCTTCATTGAGGAGGCGGTGCGCGCCTATCTTTTTGAACGGGCGGTCGAGCAAGCCA AGGCCGCGACGGCAGGTATGGGCGAGGCAGAATTGAACGACCTCATCGACGAGGCGGTGCAGTGGGCGCGTGAGCACTGA
Upstream 100 bases:
>100_bases GTTGTAGTTCAGATAAACGATCGTTTTATCGAACCATTGCGCATGTAACGAGTAAAGTGTATAAACACCTATGTGAACAA ACACTGTTCTGGAGGGCATC
Downstream 100 bases:
>100_bases TGCGGGTCGTCCTTGACACCAACGTGCTGCTGGCCGCGCTGATCTCGTCGCACAGCCCTCCCGACATCATCTATCGCGCC TGGCTTGCTGGACGTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEEAVRAYLFERAVEQAKAATAGMGEAELNDLIDEAVQWAREH
Sequences:
>Translated_79_residues MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEEAVRAYLFERAVEQAKAATAGMGEAELNDLIDEAVQWAREH >Mature_79_residues MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEEAVRAYLFERAVEQAKAATAGMGEAELNDLIDEAVQWAREH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8765; Mature: 8765
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEEAVRAYLFERAVEQAKAATAGM CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GEAELNDLIDEAVQWAREH CHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEEAVRAYLFERAVEQAKAATAGM CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GEAELNDLIDEAVQWAREH CHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA