| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611599
Identifier: 120611599
GI number: 120611599
Start: 3225095
End: 3225418
Strand: Direct
Name: 120611599
Synonym: Aave_2936
Alternate gene names: NA
Gene position: 3225095-3225418 (Clockwise)
Preceding gene: 120611588
Following gene: 120611600
Centisome position: 60.25
GC content: 66.67
Gene sequence:
>324_bases ATGAGGAAGTCCCCGAAGTTTTCCCCCGAGGTCCAGGAGCGAGCGGTGCGGATGGTGCTGGAGCACCAGGGCGAGCACGG ATCGCAGTGGGCGGCGATCGAGTCGATTGCCGGCAAGATGGGCTGCACTACCGAGACGCTGCGGCGTTGGGTGCGGCAGG CAGAGCGCGACCAGGGCAAGCGGCCCGGCGTGACTAGCCAGGAGCAGGCGCGGATCAAGGTGCTGGAGCGTGAGAACCGC GAACTGCGCCAGGCCAACGAGATTCTGCGCAAGGCGTCGGCGTATTTTGCCCAGGCGGAGCTCGACCGCCGGTTCAAGCC ATGA
Upstream 100 bases:
>100_bases TTACAGCAAGTTAGCTCACTTTTGGCTGTTTTTTACACGAATCCCTGCCGTGAACCGCCCCGGCTTTCCCGGAGGCTCTT TCCCTTGAGAGGATAGAGCC
Downstream 100 bases:
>100_bases CGGGGTTCATCGACGAACACCGCGCCAGGTACGGAGTCGAGCCGATCTGCAGGGTGCTGCCGATCGCTCCGTCGACCTAC TACACGCACGCGGCTCGGCA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRKSPKFSPEVQERAVRMVLEHQGEHGSQWAAIESIAGKMGCTTETLRRWVRQAERDQGKRPGVTSQEQARIKVLERENR ELRQANEILRKASAYFAQAELDRRFKP
Sequences:
>Translated_107_residues MRKSPKFSPEVQERAVRMVLEHQGEHGSQWAAIESIAGKMGCTTETLRRWVRQAERDQGKRPGVTSQEQARIKVLERENR ELRQANEILRKASAYFAQAELDRRFKP >Mature_107_residues MRKSPKFSPEVQERAVRMVLEHQGEHGSQWAAIESIAGKMGCTTETLRRWVRQAERDQGKRPGVTSQEQARIKVLERENR ELRQANEILRKASAYFAQAELDRRFKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 12462; Mature: 12462
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSPKFSPEVQERAVRMVLEHQGEHGSQWAAIESIAGKMGCTTETLRRWVRQAERDQGK CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC RPGVTSQEQARIKVLERENRELRQANEILRKASAYFAQAELDRRFKP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKSPKFSPEVQERAVRMVLEHQGEHGSQWAAIESIAGKMGCTTETLRRWVRQAERDQGK CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC RPGVTSQEQARIKVLERENRELRQANEILRKASAYFAQAELDRRFKP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]