| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611584
Identifier: 120611584
GI number: 120611584
Start: 3210117
End: 3210404
Strand: Direct
Name: 120611584
Synonym: Aave_2920
Alternate gene names: NA
Gene position: 3210117-3210404 (Clockwise)
Preceding gene: 120611583
Following gene: 120611585
Centisome position: 59.97
GC content: 67.71
Gene sequence:
>288_bases ATGCCTTTCTACCGATTGAAGACCGGCATGGTCCATGTGCGGGGCACGAAGCTACCGCCGCCTTGCAGTGCGCACGTGCT GGTGGACGGCGAGCAACCGCGGTGCATGGCGCCTAGCGAGTTCCTATGCGACGGCCCGAGCGCGGCCGATCCTCGCAGCA CCTGCGACGCGGCGCTGTGCGAAGCCCACGCGCACCGCATCGCCATCAACCGTCACCACTGCCCGTCCTGCCACCTGGCG CACAGCGATGCGGCCGGGCAGCGCAGCCTGTTCACCTCCCTCGTTTAA
Upstream 100 bases:
>100_bases TGGAGCGCTTTCGCTGGCCCCATCGCATCAAGCGGGATGCGTGGGCTTGGGACTTTGCCGTCAGTGCGATGCGTCTGCCC TTCGCTACGGAGGCACGCTG
Downstream 100 bases:
>100_bases AGCCATGGCACGCACCTTCGCATCCCACACGAACCGGCCCGCTGTGGAGGCCCAGCGCAAGCGCGACCTGGGCCTGATCC ACCAGGGCAAGTCGGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MPFYRLKTGMVHVRGTKLPPPCSAHVLVDGEQPRCMAPSEFLCDGPSAADPRSTCDAALCEAHAHRIAINRHHCPSCHLA HSDAAGQRSLFTSLV
Sequences:
>Translated_95_residues MPFYRLKTGMVHVRGTKLPPPCSAHVLVDGEQPRCMAPSEFLCDGPSAADPRSTCDAALCEAHAHRIAINRHHCPSCHLA HSDAAGQRSLFTSLV >Mature_94_residues PFYRLKTGMVHVRGTKLPPPCSAHVLVDGEQPRCMAPSEFLCDGPSAADPRSTCDAALCEAHAHRIAINRHHCPSCHLAH SDAAGQRSLFTSLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10259; Mature: 10128
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFYRLKTGMVHVRGTKLPPPCSAHVLVDGEQPRCMAPSEFLCDGPSAADPRSTCDAALC CCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHH EAHAHRIAINRHHCPSCHLAHSDAAGQRSLFTSLV HHHHHEEEECCCCCCCCEECCCCCCCCHHHHHHCC >Mature Secondary Structure PFYRLKTGMVHVRGTKLPPPCSAHVLVDGEQPRCMAPSEFLCDGPSAADPRSTCDAALC CCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHH EAHAHRIAINRHHCPSCHLAHSDAAGQRSLFTSLV HHHHHEEEECCCCCCCCEECCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA