| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611573
Identifier: 120611573
GI number: 120611573
Start: 3205404
End: 3206069
Strand: Direct
Name: 120611573
Synonym: Aave_2909
Alternate gene names: NA
Gene position: 3205404-3206069 (Clockwise)
Preceding gene: 120611572
Following gene: 120611574
Centisome position: 59.88
GC content: 72.22
Gene sequence:
>666_bases ATGACCCACCTCTGGCTTTGCCGAGACGCACTCGTCGCGCTGGGCCAACATCTGGCCCGCCGGCCGCGCGCCTTCACGGT CGCCGAGCTGGTGGAGTGGACGCCCAGCCTCGAAACTAAAACGGGCCACCGTGCCTGCCAGCTACTGCAGACCGCCGGGA TGATCCAGCCCGCGCCGCCCGCCGCAGGCGACACGCGCGCCAACCAGAACCCCTCGCGCCCCGCGGCCTGGGAGCTGACG GCAGCGGGTCGCGAAGCAGCCCGCGCCGCCCACATGGAGGCGACGTCCAAGAAGCGCGCCGAGACGATGGCGGCGATCAA CCGCCGCCCGCGCACGGATGCGCTGCCCGCGCGGCTCTGGACCATGCTGCGCGCGCGCACAACCCTCACGGCCGATGAGG CCGCCGGGGTGCTGGGCGACGCGGGGGCCGATCTCCGGCCGCTCAAGAAGGCCATCGGCAAGCTGCTGTCTGCGTGGCAT GCCGTGGCGCCTGACTTGGTCAAGGTCGGCGCGCGGCGCGTGGGCAGGGCCTACCAATACGTGCTTGTGGGCAGCGCAGG ACGGTTCCCGCCCGAGGTCCACACGCCAGAAGCCGCCGAGCGCATCCGCGCGCATTCCGCGGCCAAGGCAGAGGCCAAGG CCAAGGCTGAGGAGGCGCATGCATGA
Upstream 100 bases:
>100_bases ATCGCATCACGATCGAGCATGTCGCGCGCCGCGCGCTGTGCACCGAATTCAGCGGCAAGAGCCTGGGCCGCCGCGCCCCC ACGCTGGGAGGTGACGCAGC
Downstream 100 bases:
>100_bases CCGAGCGCCCGTACATGCAGGAGCCCTGGTACGCGCTGCTGATGTCGAGGTGCGCGGGCGGCGTGACGCGCACGCTGATC GCCAAGCAGCTCGGGCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTHLWLCRDALVALGQHLARRPRAFTVAELVEWTPSLETKTGHRACQLLQTAGMIQPAPPAAGDTRANQNPSRPAAWELT AAGREAARAAHMEATSKKRAETMAAINRRPRTDALPARLWTMLRARTTLTADEAAGVLGDAGADLRPLKKAIGKLLSAWH AVAPDLVKVGARRVGRAYQYVLVGSAGRFPPEVHTPEAAERIRAHSAAKAEAKAKAEEAHA
Sequences:
>Translated_221_residues MTHLWLCRDALVALGQHLARRPRAFTVAELVEWTPSLETKTGHRACQLLQTAGMIQPAPPAAGDTRANQNPSRPAAWELT AAGREAARAAHMEATSKKRAETMAAINRRPRTDALPARLWTMLRARTTLTADEAAGVLGDAGADLRPLKKAIGKLLSAWH AVAPDLVKVGARRVGRAYQYVLVGSAGRFPPEVHTPEAAERIRAHSAAKAEAKAKAEEAHA >Mature_220_residues THLWLCRDALVALGQHLARRPRAFTVAELVEWTPSLETKTGHRACQLLQTAGMIQPAPPAAGDTRANQNPSRPAAWELTA AGREAARAAHMEATSKKRAETMAAINRRPRTDALPARLWTMLRARTTLTADEAAGVLGDAGADLRPLKKAIGKLLSAWHA VAPDLVKVGARRVGRAYQYVLVGSAGRFPPEVHTPEAAERIRAHSAAKAEAKAKAEEAHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23772; Mature: 23640
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLWLCRDALVALGQHLARRPRAFTVAELVEWTPSLETKTGHRACQLLQTAGMIQPAPP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC AAGDTRANQNPSRPAAWELTAAGREAARAAHMEATSKKRAETMAAINRRPRTDALPARLW CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TMLRARTTLTADEAAGVLGDAGADLRPLKKAIGKLLSAWHAVAPDLVKVGARRVGRAYQY HHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VLVGSAGRFPPEVHTPEAAERIRAHSAAKAEAKAKAEEAHA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure THLWLCRDALVALGQHLARRPRAFTVAELVEWTPSLETKTGHRACQLLQTAGMIQPAPP CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC AAGDTRANQNPSRPAAWELTAAGREAARAAHMEATSKKRAETMAAINRRPRTDALPARLW CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH TMLRARTTLTADEAAGVLGDAGADLRPLKKAIGKLLSAWHAVAPDLVKVGARRVGRAYQY HHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VLVGSAGRFPPEVHTPEAAERIRAHSAAKAEAKAKAEEAHA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA