Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611568

Identifier: 120611568

GI number: 120611568

Start: 3200905

End: 3201300

Strand: Reverse

Name: 120611568

Synonym: Aave_2904

Alternate gene names: NA

Gene position: 3201300-3200905 (Counterclockwise)

Preceding gene: 120611569

Following gene: 120611567

Centisome position: 59.81

GC content: 55.05

Gene sequence:

>396_bases
TTGACAGGTCTCTACAGGCAGATCCAAGCGATCAAAGAAAAGCTGCTGCCGAAGCTCATCAATCGAGGATCAGGGGGAGT
CCAGGTGGGCAAAGTGGATGGTGATGTCACAGCTACGAGCTACGTGACCATCGTGAATCTCCATGCTGAACCTACGGTGT
CGAAGGACGAGGAACCTGCGCCCATTTCCCTAACGACCCCGGAACAGCGTGAAGTCCTTCGAATGATTCGACAGCTCCCC
GTCGCGGACAGCGTGTTCAGCTTCATGAAACGCGAGTTCGGTACGCGCATGGTGATTGATCTGCAGCCCTCACAACTGCT
TAGAGTGCGACGCTACATCGAGGCGATCAACCGGCGGCAAAAGAGATCTGAAAGCCGCGGATGCAATGCTTCGTGA

Upstream 100 bases:

>100_bases
CGCCGCAAAACATGACGATGAAGATGTCGAACAAGGCCGCAGGAGGCGTACAGGTGGGGTACGTCGGCGGTTCCGTGAAC
ACGAACAAAAGGAGGTCGAG

Downstream 100 bases:

>100_bases
GCGTGGTAGGTGCGTGCGTACTGTTGCACGGAGGACGACCATGAGAGCAATTATTTTCCCTATGCTGCTGCTGGCTGCGC
CAGCTTGGGCAGTCAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPAPISLTTPEQREVLRMIRQLP
VADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQKRSESRGCNAS

Sequences:

>Translated_131_residues
MTGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPAPISLTTPEQREVLRMIRQLP
VADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQKRSESRGCNAS
>Mature_130_residues
TGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPAPISLTTPEQREVLRMIRQLPV
ADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQKRSESRGCNAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14783; Mature: 14652

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPA
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHEEEEEEEECCCCCCCCCCCCC
PISLTTPEQREVLRMIRQLPVADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQ
CEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHH
KRSESRGCNAS
HHHHCCCCCCC
>Mature Secondary Structure 
TGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPA
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHEEEEEEEECCCCCCCCCCCCC
PISLTTPEQREVLRMIRQLPVADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQ
CEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHH
KRSESRGCNAS
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA