| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611568
Identifier: 120611568
GI number: 120611568
Start: 3200905
End: 3201300
Strand: Reverse
Name: 120611568
Synonym: Aave_2904
Alternate gene names: NA
Gene position: 3201300-3200905 (Counterclockwise)
Preceding gene: 120611569
Following gene: 120611567
Centisome position: 59.81
GC content: 55.05
Gene sequence:
>396_bases TTGACAGGTCTCTACAGGCAGATCCAAGCGATCAAAGAAAAGCTGCTGCCGAAGCTCATCAATCGAGGATCAGGGGGAGT CCAGGTGGGCAAAGTGGATGGTGATGTCACAGCTACGAGCTACGTGACCATCGTGAATCTCCATGCTGAACCTACGGTGT CGAAGGACGAGGAACCTGCGCCCATTTCCCTAACGACCCCGGAACAGCGTGAAGTCCTTCGAATGATTCGACAGCTCCCC GTCGCGGACAGCGTGTTCAGCTTCATGAAACGCGAGTTCGGTACGCGCATGGTGATTGATCTGCAGCCCTCACAACTGCT TAGAGTGCGACGCTACATCGAGGCGATCAACCGGCGGCAAAAGAGATCTGAAAGCCGCGGATGCAATGCTTCGTGA
Upstream 100 bases:
>100_bases CGCCGCAAAACATGACGATGAAGATGTCGAACAAGGCCGCAGGAGGCGTACAGGTGGGGTACGTCGGCGGTTCCGTGAAC ACGAACAAAAGGAGGTCGAG
Downstream 100 bases:
>100_bases GCGTGGTAGGTGCGTGCGTACTGTTGCACGGAGGACGACCATGAGAGCAATTATTTTCCCTATGCTGCTGCTGGCTGCGC CAGCTTGGGCAGTCAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPAPISLTTPEQREVLRMIRQLP VADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQKRSESRGCNAS
Sequences:
>Translated_131_residues MTGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPAPISLTTPEQREVLRMIRQLP VADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQKRSESRGCNAS >Mature_130_residues TGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPAPISLTTPEQREVLRMIRQLPV ADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQKRSESRGCNAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14783; Mature: 14652
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPA CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHEEEEEEEECCCCCCCCCCCCC PISLTTPEQREVLRMIRQLPVADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQ CEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHH KRSESRGCNAS HHHHCCCCCCC >Mature Secondary Structure TGLYRQIQAIKEKLLPKLINRGSGGVQVGKVDGDVTATSYVTIVNLHAEPTVSKDEEPA CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHEEEEEEEECCCCCCCCCCCCC PISLTTPEQREVLRMIRQLPVADSVFSFMKREFGTRMVIDLQPSQLLRVRRYIEAINRRQ CEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHH KRSESRGCNAS HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA