| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611566
Identifier: 120611566
GI number: 120611566
Start: 3198479
End: 3199015
Strand: Reverse
Name: 120611566
Synonym: Aave_2902
Alternate gene names: NA
Gene position: 3199015-3198479 (Counterclockwise)
Preceding gene: 120611567
Following gene: 120611565
Centisome position: 59.76
GC content: 66.67
Gene sequence:
>537_bases TTGTGCCGAGGACTCCGGCCTCACGCTCGACGACGCCTGGGCCAACCACCGCGCCAACGCGCGCACATGCGCCGACGACC GGCAGCGTTACCGCGCCTTGATCGACTACATCCAATCCACAACAGCGAGTCCCCAATGAGCGACCCCAACACGAAGCCCG ACGACCGGAAACAGGAGCTGCTGCTGCTCGGGCAAATCCACGGCATGGTGCAGTCGCTGCAGGGCAGCATCGAGCAACAG ACCCGCCGCATGGATCGCATGGAGGCGAGCCAGGAAGAGCGGCACCGCTCCAACGAGCAGCGCATGGAGCAATCGGAGGC CCGCCAACAGGAACGCCACAAGGCCAACGAGCTGCGCATGGACCGCGCCGAAGAGCGGCAGGAGGAGCGGCATGTAGCGA TCGACGCGCGCCTGCGCGTCGTCGAGCAAAAGGCGGCGATTGCAGGCGCTGTCAGCGGGTCCGCCGTGTCCGTGGGCGTA GCTCTCGCCATCGAAGGGCTGAAGCAGTGGCTGGCCCGCGGAGGCATGGGTCAGTAA
Upstream 100 bases:
>100_bases CCCTGGCTGCTGTCCGGGTGTGGAACGGCGCCCTCACCAGCACGGACGCGCCTGCAGGTGCCTGCGGCGCTGCTGCTGCC ACCGAGGGAGCCGACCCTGC
Downstream 100 bases:
>100_bases TGGCACACGCGCAGGAGAAACGCACCCAGCTCCGGGGGCTGTACATCTACCAGCGCCTGCCGATGGAGGCGGCCTGCAAG AAGGTGGGCGTGCCGCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MCRGLRPHARRRLGQPPRQRAHMRRRPAALPRLDRLHPIHNSESPMSDPNTKPDDRKQELLLLGQIHGMVQSLQGSIEQQ TRRMDRMEASQEERHRSNEQRMEQSEARQQERHKANELRMDRAEERQEERHVAIDARLRVVEQKAAIAGAVSGSAVSVGV ALAIEGLKQWLARGGMGQ
Sequences:
>Translated_178_residues MCRGLRPHARRRLGQPPRQRAHMRRRPAALPRLDRLHPIHNSESPMSDPNTKPDDRKQELLLLGQIHGMVQSLQGSIEQQ TRRMDRMEASQEERHRSNEQRMEQSEARQQERHKANELRMDRAEERQEERHVAIDARLRVVEQKAAIAGAVSGSAVSVGV ALAIEGLKQWLARGGMGQ >Mature_178_residues MCRGLRPHARRRLGQPPRQRAHMRRRPAALPRLDRLHPIHNSESPMSDPNTKPDDRKQELLLLGQIHGMVQSLQGSIEQQ TRRMDRMEASQEERHRSNEQRMEQSEARQQERHKANELRMDRAEERQEERHVAIDARLRVVEQKAAIAGAVSGSAVSVGV ALAIEGLKQWLARGGMGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20403; Mature: 20403
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRGLRPHARRRLGQPPRQRAHMRRRPAALPRLDRLHPIHNSESPMSDPNTKPDDRKQEL CCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LLLGQIHGMVQSLQGSIEQQTRRMDRMEASQEERHRSNEQRMEQSEARQQERHKANELRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRAEERQEERHVAIDARLRVVEQKAAIAGAVSGSAVSVGVALAIEGLKQWLARGGMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MCRGLRPHARRRLGQPPRQRAHMRRRPAALPRLDRLHPIHNSESPMSDPNTKPDDRKQEL CCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHH LLLGQIHGMVQSLQGSIEQQTRRMDRMEASQEERHRSNEQRMEQSEARQQERHKANELRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRAEERQEERHVAIDARLRVVEQKAAIAGAVSGSAVSVGVALAIEGLKQWLARGGMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA