| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611565
Identifier: 120611565
GI number: 120611565
Start: 3197982
End: 3198479
Strand: Reverse
Name: 120611565
Synonym: Aave_2901
Alternate gene names: NA
Gene position: 3198479-3197982 (Counterclockwise)
Preceding gene: 120611566
Following gene: 120611564
Centisome position: 59.75
GC content: 66.27
Gene sequence:
>498_bases ATGGCACACGCGCAGGAGAAACGCACCCAGCTCCGGGGGCTGTACATCTACCAGCGCCTGCCGATGGAGGCGGCCTGCAA GAAGGTGGGCGTGCCGCGAAGCACGGCGAACAGGTGGAAGTCCGAGGCGCTCGAGAAGGGCGACGACTGGGATACCGTGC GCGCCGCCGTGGCCCTGGGCGACGACAACTTCGCCAGCCTCTCGAAGAAGCTGCTGGAGGACTACCTGGTGCAGCACCAG GCCACCATGGACCAGCTGCGCGAAGCCACCGGCATGAGCGCGCGGGATCGGGCCGAGACGCTCGCGAGCATGTCCGACTC GTTCAACAAGACCATGGCGAGCTTCAAGAGATTGGCGCCGGACTTGGACCGCCAGGCCGTGCAGATCGACGTGCTGCAGC GCTTCGTCACGTTCGCGCAGGTACGCTTCCCGCAGCACCTGCAGGCGGTCGCTGAGATGCTGGAGCCATTCGGCGAAGAA CTCGCGAAGGTGCGCTGA
Upstream 100 bases:
>100_bases CGATTGCAGGCGCTGTCAGCGGGTCCGCCGTGTCCGTGGGCGTAGCTCTCGCCATCGAAGGGCTGAAGCAGTGGCTGGCC CGCGGAGGCATGGGTCAGTA
Downstream 100 bases:
>100_bases CATGGCGAAGAGCCCGAAGCAATTCCTGGCCGACCTGGCGTCGCTCGCCGATGGCCTGCGCCGCCAGATCGACGCCAACC TCGACGGCTGGGACATGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAHAQEKRTQLRGLYIYQRLPMEAACKKVGVPRSTANRWKSEALEKGDDWDTVRAAVALGDDNFASLSKKLLEDYLVQHQ ATMDQLREATGMSARDRAETLASMSDSFNKTMASFKRLAPDLDRQAVQIDVLQRFVTFAQVRFPQHLQAVAEMLEPFGEE LAKVR
Sequences:
>Translated_165_residues MAHAQEKRTQLRGLYIYQRLPMEAACKKVGVPRSTANRWKSEALEKGDDWDTVRAAVALGDDNFASLSKKLLEDYLVQHQ ATMDQLREATGMSARDRAETLASMSDSFNKTMASFKRLAPDLDRQAVQIDVLQRFVTFAQVRFPQHLQAVAEMLEPFGEE LAKVR >Mature_164_residues AHAQEKRTQLRGLYIYQRLPMEAACKKVGVPRSTANRWKSEALEKGDDWDTVRAAVALGDDNFASLSKKLLEDYLVQHQA TMDQLREATGMSARDRAETLASMSDSFNKTMASFKRLAPDLDRQAVQIDVLQRFVTFAQVRFPQHLQAVAEMLEPFGEEL AKVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18718; Mature: 18586
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAQEKRTQLRGLYIYQRLPMEAACKKVGVPRSTANRWKSEALEKGDDWDTVRAAVALG CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC DDNFASLSKKLLEDYLVQHQATMDQLREATGMSARDRAETLASMSDSFNKTMASFKRLAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DLDRQAVQIDVLQRFVTFAQVRFPQHLQAVAEMLEPFGEELAKVR CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHAQEKRTQLRGLYIYQRLPMEAACKKVGVPRSTANRWKSEALEKGDDWDTVRAAVALG CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC DDNFASLSKKLLEDYLVQHQATMDQLREATGMSARDRAETLASMSDSFNKTMASFKRLAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DLDRQAVQIDVLQRFVTFAQVRFPQHLQAVAEMLEPFGEELAKVR CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA