| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611560
Identifier: 120611560
GI number: 120611560
Start: 3191576
End: 3191845
Strand: Reverse
Name: 120611560
Synonym: Aave_2896
Alternate gene names: NA
Gene position: 3191845-3191576 (Counterclockwise)
Preceding gene: 120611561
Following gene: 120611559
Centisome position: 59.63
GC content: 65.93
Gene sequence:
>270_bases ATGTCCGATACCAAGAGCCCGGCCGAGCAGCCGGCCGCACTCAAAGAACTGACCTCCGCCGAGGCCGCCAAGCGCGTACA GCGCAAGGTGGTCGAGCGCGTCGAAGCCAAGGGCGAAGACGGAAAGCCCGTAGCGCAGGTGCGCGAAAAGCGCGTGCCCG TCAAAGCCGATGAAGTGCTGTCCTTCCGCGACTACGGCACCTATGTCGTCGTCGTCACGCGCGACGGCCAGAAGCTCTCC AGCCTCGACTCGGAAGCCGCGGCGCGATGA
Upstream 100 bases:
>100_bases CGCCGGGCCGACACATGTCGGCCTTAGTTTTTTGGCGCCCCCCCGGCACAGTCACTCCACCGCCGCCGCGCCTGTGCGGC CTACCTGGATGGAGTGATGC
Downstream 100 bases:
>100_bases TCAAGCTCCTGCCCGCCGGCACCGGCTATGCGCGCCTCTCCGAGGCCGTGACGACCGAGTACGGCCAGCTCATCGACCTC GTTCGCCAAGCCGTGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSDTKSPAEQPAALKELTSAEAAKRVQRKVVERVEAKGEDGKPVAQVREKRVPVKADEVLSFRDYGTYVVVVTRDGQKLS SLDSEAAAR
Sequences:
>Translated_89_residues MSDTKSPAEQPAALKELTSAEAAKRVQRKVVERVEAKGEDGKPVAQVREKRVPVKADEVLSFRDYGTYVVVVTRDGQKLS SLDSEAAAR >Mature_88_residues SDTKSPAEQPAALKELTSAEAAKRVQRKVVERVEAKGEDGKPVAQVREKRVPVKADEVLSFRDYGTYVVVVTRDGQKLSS LDSEAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9729; Mature: 9598
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTKSPAEQPAALKELTSAEAAKRVQRKVVERVEAKGEDGKPVAQVREKRVPVKADEVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH SFRDYGTYVVVVTRDGQKLSSLDSEAAAR HHCCCCCEEEEEECCCHHHHHCCHHHCCC >Mature Secondary Structure SDTKSPAEQPAALKELTSAEAAKRVQRKVVERVEAKGEDGKPVAQVREKRVPVKADEVL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH SFRDYGTYVVVVTRDGQKLSSLDSEAAAR HHCCCCCEEEEEECCCHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA