| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yetK [H]
Identifier: 120611526
GI number: 120611526
Start: 3153797
End: 3154753
Strand: Direct
Name: yetK [H]
Synonym: Aave_2862
Alternate gene names: 120611526
Gene position: 3153797-3154753 (Clockwise)
Preceding gene: 120611515
Following gene: 120611528
Centisome position: 58.92
GC content: 69.38
Gene sequence:
>957_bases ATGCCCAGCCGCCCCGTCGCCTATCTCTGCCTTGCCCTCAGCATGACCCTGGTGGGCAGCTACGTCGCATTCTCCAAGCC CCTGTCCCAGGCGCTGCCGGTGTTCCTGCTGGCATGGATGCGGTTCGGGATCGGCGGGCTGGGCATGCTGTCGTGGCTGC GCAAGCCGGCCGACGAGCCGCCCATGTCCCCTCAGGTGCGCCGGCTGCTGTTCCTGGAATCGTTCCTGGGCAATTTCCTG TTCACGCTGTGCATGATCTCGGGCGTCGGGCTGACCAGCGCGGTCACTGCCGGCGTCACCATGGCAGGCATTCCGGCGGC GGTCGCCGTGATGAGCTGGTTCTTCCTGAAGGAGCGGGTGCCGCGCCGGACCTGGGCCGCCGTGGGCCTCGCGGTAGTGG GCATCGCGCTGTTTTCCGTAGCCCAGCCGGGAGGCGGTGCGCACGCCGGTACCGGCGCGCAGGGCGTCGCCCAGCCCCGC CACCTCGTCTGGCTCGGGCAATTGCTGTTGATCGGCGCGGTGATCTGCGAGGCCGCCTATTCCGTGATCGGCAAGAAGCT CACGGGCACGCTCGGTCCGCGCCGCATCACGGCGCTGATCAATCTGTGGGGATTCCTGCTGGCCACGCCGTTGGGGCTGT ACGCCGCGCTGCAGTTCGATTTCTCGTCGCTCGAGCCCGGCATGTGGCTGCTGCTGGTGTTCTACGCACTGGCCGCCAGC GTATGGACCGTCTGGCTGTGGATGACGGGACTGAAGGTCGTGCCCGCCGCCCAGGGCGGTGTCTTCACCGTGATGCTGCC GGTGAGCGCGGCGCTGGTCGGCGTGGTGGTGCTGGGCGAGCGGTTCACGCCGCTGCAACTGGTGGCTTTCGGGATCGCGG TGGCGAGCGTGGTGCTGGCCACGCTGCCCGGGCGCCGGAAGGCGCCGGCACCCGGAGCACAGGGCCCGCAGGCTTGA
Upstream 100 bases:
>100_bases CGTGGCGTGCGGAATCGAAGCGCGGCGGCTGAGGCATGATGCGTGGTCCTAGAAATCAGCGTCGGCCCTTCAGTCTATCG ATCCGGGCCGCGATCGCCGC
Downstream 100 bases:
>100_bases GCGGCGGGCCGCTGCGCGGCCTCAGCGGCCCGTGACCTTGCGGATGGGCGGCCGGATGCTGTCGCGGCGGGCCGGCAGCA CCGGGGCGTTTTCCCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPSRPVAYLCLALSMTLVGSYVAFSKPLSQALPVFLLAWMRFGIGGLGMLSWLRKPADEPPMSPQVRRLLFLESFLGNFL FTLCMISGVGLTSAVTAGVTMAGIPAAVAVMSWFFLKERVPRRTWAAVGLAVVGIALFSVAQPGGGAHAGTGAQGVAQPR HLVWLGQLLLIGAVICEAAYSVIGKKLTGTLGPRRITALINLWGFLLATPLGLYAALQFDFSSLEPGMWLLLVFYALAAS VWTVWLWMTGLKVVPAAQGGVFTVMLPVSAALVGVVVLGERFTPLQLVAFGIAVASVVLATLPGRRKAPAPGAQGPQA
Sequences:
>Translated_318_residues MPSRPVAYLCLALSMTLVGSYVAFSKPLSQALPVFLLAWMRFGIGGLGMLSWLRKPADEPPMSPQVRRLLFLESFLGNFL FTLCMISGVGLTSAVTAGVTMAGIPAAVAVMSWFFLKERVPRRTWAAVGLAVVGIALFSVAQPGGGAHAGTGAQGVAQPR HLVWLGQLLLIGAVICEAAYSVIGKKLTGTLGPRRITALINLWGFLLATPLGLYAALQFDFSSLEPGMWLLLVFYALAAS VWTVWLWMTGLKVVPAAQGGVFTVMLPVSAALVGVVVLGERFTPLQLVAFGIAVASVVLATLPGRRKAPAPGAQGPQA >Mature_317_residues PSRPVAYLCLALSMTLVGSYVAFSKPLSQALPVFLLAWMRFGIGGLGMLSWLRKPADEPPMSPQVRRLLFLESFLGNFLF TLCMISGVGLTSAVTAGVTMAGIPAAVAVMSWFFLKERVPRRTWAAVGLAVVGIALFSVAQPGGGAHAGTGAQGVAQPRH LVWLGQLLLIGAVICEAAYSVIGKKLTGTLGPRRITALINLWGFLLATPLGLYAALQFDFSSLEPGMWLLLVFYALAASV WTVWLWMTGLKVVPAAQGGVFTVMLPVSAALVGVVVLGERFTPLQLVAFGIAVASVVLATLPGRRKAPAPGAQGPQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33473; Mature: 33341
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRPVAYLCLALSMTLVGSYVAFSKPLSQALPVFLLAWMRFGIGGLGMLSWLRKPADEP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC PMSPQVRRLLFLESFLGNFLFTLCMISGVGLTSAVTAGVTMAGIPAAVAVMSWFFLKERV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PRRTWAAVGLAVVGIALFSVAQPGGGAHAGTGAQGVAQPRHLVWLGQLLLIGAVICEAAY CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVIGKKLTGTLGPRRITALINLWGFLLATPLGLYAALQFDFSSLEPGMWLLLVFYALAAS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHH VWTVWLWMTGLKVVPAAQGGVFTVMLPVSAALVGVVVLGERFTPLQLVAFGIAVASVVLA HHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLPGRRKAPAPGAQGPQA HCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSRPVAYLCLALSMTLVGSYVAFSKPLSQALPVFLLAWMRFGIGGLGMLSWLRKPADEP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC PMSPQVRRLLFLESFLGNFLFTLCMISGVGLTSAVTAGVTMAGIPAAVAVMSWFFLKERV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PRRTWAAVGLAVVGIALFSVAQPGGGAHAGTGAQGVAQPRHLVWLGQLLLIGAVICEAAY CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVIGKKLTGTLGPRRITALINLWGFLLATPLGLYAALQFDFSSLEPGMWLLLVFYALAAS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHH VWTVWLWMTGLKVVPAAQGGVFTVMLPVSAALVGVVVLGERFTPLQLVAFGIAVASVVLA HHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLPGRRKAPAPGAQGPQA HCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]