| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yehV [C]
Identifier: 120611516
GI number: 120611516
Start: 3143547
End: 3143939
Strand: Reverse
Name: yehV [C]
Synonym: Aave_2852
Alternate gene names: 120611516
Gene position: 3143939-3143547 (Counterclockwise)
Preceding gene: 120611517
Following gene: 120611514
Centisome position: 58.73
GC content: 63.87
Gene sequence:
>393_bases ATGGGCACGCCGCTTCCTTCCATTCCCGCGAAAAGGTACTTCACCATCGGCGAAGTCGCCGAGCTGTGCGGAGTCAAGCC CCACGTGCTGCGGTACTGGGAGCAGGAGTTCACACAACTGCGCCCCATGAAGCGCAGGGGCAACCGCAGGTATTACCAGC ACCACGAGGTGCTGATGATCCGCCGCATCCGCGAACTCCTGTACGACCAGGGCTTCACGATCAGCGGGGCGCGCAACCGC CTGCAGGAAGTGGACAGCCACGGAGAAGGCGACGAGGGGGATGCGTTGTCGGCGACGGGGAGCGCGGGTGCCCTGGCGGA GCGCGGCGGCCTGTCCCTGGAGGGGGTGCGCAAAGAATTATTGGAAATTCGTGCACTTTTGTCCGACCACTGA
Upstream 100 bases:
>100_bases CACGTGGCACCTTTCGGCCGGCACTTGCCCGAGCCGCTGGCGCGTTCCCCGGCCCTGCAGTACCCTTCCCGCCGTCCGCC TTTACCCTCTGCGCACTCCC
Downstream 100 bases:
>100_bases TTTTTTGCCTATATAATCTAAGTCTTGTCGGCGTGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCG AGTTCGAATCCCGCCACGCC
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MGTPLPSIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRELLYDQGFTISGARNR LQEVDSHGEGDEGDALSATGSAGALAERGGLSLEGVRKELLEIRALLSDH
Sequences:
>Translated_130_residues MGTPLPSIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRELLYDQGFTISGARNR LQEVDSHGEGDEGDALSATGSAGALAERGGLSLEGVRKELLEIRALLSDH >Mature_129_residues GTPLPSIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRELLYDQGFTISGARNRL QEVDSHGEGDEGDALSATGSAGALAERGGLSLEGVRKELLEIRALLSDH
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14746; Mature: 14615
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPLPSIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RRIRELLYDQGFTISGARNRLQEVDSHGEGDEGDALSATGSAGALAERGGLSLEGVRKEL HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH LEIRALLSDH HHHHHHHHCC >Mature Secondary Structure GTPLPSIPAKRYFTIGEVAELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMI CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RRIRELLYDQGFTISGARNRLQEVDSHGEGDEGDALSATGSAGALAERGGLSLEGVRKEL HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH LEIRALLSDH HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA