| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611506
Identifier: 120611506
GI number: 120611506
Start: 3127959
End: 3129083
Strand: Reverse
Name: 120611506
Synonym: Aave_2842
Alternate gene names: NA
Gene position: 3129083-3127959 (Counterclockwise)
Preceding gene: 120611507
Following gene: 120611505
Centisome position: 58.46
GC content: 69.16
Gene sequence:
>1125_bases ATGAGCAATTTCCAACTCGGCCTCATCATCGCGGGTGGCGTGGTATTGGCCATCGTCGTCGCCTACAACGCCTGGACCAC CCACCGCAACGCGCCCAAGCGGGCCAGTCCCCAGGGGGGACCGGAGGCAGCCGGCGCCGATACGCTGGTACGCCAGGAGC CCGGCTTCGACCTGCCCGCCGGCACGGCCGGTGGCCCGCCGGCCGGTACGTCGCAGGCGGCGGCTTCCGATGAGGCGCAC CAGGGCGGCCATACCGTGGACTGGCAGGATTCGCTGCAGATGCCCGTACCTCCCGCCGAACGCCGGGGAGGGCTCGATCC GCTGATCGATGCCATCGCACCGATCGTTCCCGAGCAGGTCGTCTCCGGCGATGCCGCGCTGGCGGCGCTGCCGACCACCC GCCGGGCGGGCAGCAAGCCGTTCGCCATCGAAGGCTTCAACGAAGCGGCACAGCAGTGGGAGACACCCATGCCGGGCCAG CGCTACACCCAGTTCCAGGCCGGCGTGCAGCTCGCCAACCGCGTCGGGGCCCTCAACGAGATCGAATTCTCCGAGTTCGT GCTCAAGGCCCAGGGCTTCGCGGATGCGATCAATGCCACGCCCGATTTTCCCGACATGTTGCACGAGGTCGGCCGCGCTC GCGAACTGGACCAGTTCGCCAGCGATCACGATGCGCAATTGGCGTTCTGCCTGCGCGCCCGCCATGCGGCATGGAGCCCG GGGTACGTGCAGCAGAATGCGCTGCGCCAGGGCTTCACGCCGGGCGCCATGCCCGGCCGCCTGGTTCTGCCGGCAGGTGG GCAGGGGCTCCCACCCGTGCTCACGCTGTCCTACGACACCCAGGCCGCCCTGTCGGAAGATCCCGAGCAATCGGCCATCC GGGACATCACGCTCAGCCTGGACGTGGCGCAGGTCCACCGCAGCGAGCAACCTTTCGCCCGGCTGCGGGAGGTGGCTGCA TCCCTGGGCCAGGCCATGGACGGCGTGCTGTGCGACCAGAACGGCACGCCGCTGCCTGCCATGACCATGGACCCGATTGC CGCGGACCTGGAACTGCTCTACGACAAGCTCGACAGCCGTGAACTGTCTGCCGGATCGGTGCTGGCGCGGCGGCTGTTCA GCTGA
Upstream 100 bases:
>100_bases CATGGAGTCCGCGCTGTCCATGGCCGAGGCCTGATGTCCTACAGCAAGTACGCATGAAGCAGGGCAGCCGGCCACCGCGT TACATCGTTTCACTCACACC
Downstream 100 bases:
>100_bases ACATCGCACGGCGGCCCGGCGGCGGCCCGCCGTGCCCCCTTTCCCGAAAGACGATCGCCATGGCCGAACATCCCGACCTG TTTTCCGCCCCTGCCCAGGA
Product: ZipA protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSNFQLGLIIAGGVVLAIVVAYNAWTTHRNAPKRASPQGGPEAAGADTLVRQEPGFDLPAGTAGGPPAGTSQAAASDEAH QGGHTVDWQDSLQMPVPPAERRGGLDPLIDAIAPIVPEQVVSGDAALAALPTTRRAGSKPFAIEGFNEAAQQWETPMPGQ RYTQFQAGVQLANRVGALNEIEFSEFVLKAQGFADAINATPDFPDMLHEVGRARELDQFASDHDAQLAFCLRARHAAWSP GYVQQNALRQGFTPGAMPGRLVLPAGGQGLPPVLTLSYDTQAALSEDPEQSAIRDITLSLDVAQVHRSEQPFARLREVAA SLGQAMDGVLCDQNGTPLPAMTMDPIAADLELLYDKLDSRELSAGSVLARRLFS
Sequences:
>Translated_374_residues MSNFQLGLIIAGGVVLAIVVAYNAWTTHRNAPKRASPQGGPEAAGADTLVRQEPGFDLPAGTAGGPPAGTSQAAASDEAH QGGHTVDWQDSLQMPVPPAERRGGLDPLIDAIAPIVPEQVVSGDAALAALPTTRRAGSKPFAIEGFNEAAQQWETPMPGQ RYTQFQAGVQLANRVGALNEIEFSEFVLKAQGFADAINATPDFPDMLHEVGRARELDQFASDHDAQLAFCLRARHAAWSP GYVQQNALRQGFTPGAMPGRLVLPAGGQGLPPVLTLSYDTQAALSEDPEQSAIRDITLSLDVAQVHRSEQPFARLREVAA SLGQAMDGVLCDQNGTPLPAMTMDPIAADLELLYDKLDSRELSAGSVLARRLFS >Mature_373_residues SNFQLGLIIAGGVVLAIVVAYNAWTTHRNAPKRASPQGGPEAAGADTLVRQEPGFDLPAGTAGGPPAGTSQAAASDEAHQ GGHTVDWQDSLQMPVPPAERRGGLDPLIDAIAPIVPEQVVSGDAALAALPTTRRAGSKPFAIEGFNEAAQQWETPMPGQR YTQFQAGVQLANRVGALNEIEFSEFVLKAQGFADAINATPDFPDMLHEVGRARELDQFASDHDAQLAFCLRARHAAWSPG YVQQNALRQGFTPGAMPGRLVLPAGGQGLPPVLTLSYDTQAALSEDPEQSAIRDITLSLDVAQVHRSEQPFARLREVAAS LGQAMDGVLCDQNGTPLPAMTMDPIAADLELLYDKLDSRELSAGSVLARRLFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39597; Mature: 39466
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFQLGLIIAGGVVLAIVVAYNAWTTHRNAPKRASPQGGPEAAGADTLVRQEPGFDLPA CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC GTAGGPPAGTSQAAASDEAHQGGHTVDWQDSLQMPVPPAERRGGLDPLIDAIAPIVPEQV CCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCHHHH VSGDAALAALPTTRRAGSKPFAIEGFNEAAQQWETPMPGQRYTQFQAGVQLANRVGALNE HCCCCCEEECCCHHCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCH IEFSEFVLKAQGFADAINATPDFPDMLHEVGRARELDQFASDHDAQLAFCLRARHAAWSP HHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC GYVQQNALRQGFTPGAMPGRLVLPAGGQGLPPVLTLSYDTQAALSEDPEQSAIRDITLSL CHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHEEE DVAQVHRSEQPFARLREVAASLGQAMDGVLCDQNGTPLPAMTMDPIAADLELLYDKLDSR EHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC ELSAGSVLARRLFS CCCHHHHHHHHHCC >Mature Secondary Structure SNFQLGLIIAGGVVLAIVVAYNAWTTHRNAPKRASPQGGPEAAGADTLVRQEPGFDLPA CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC GTAGGPPAGTSQAAASDEAHQGGHTVDWQDSLQMPVPPAERRGGLDPLIDAIAPIVPEQV CCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCHHHH VSGDAALAALPTTRRAGSKPFAIEGFNEAAQQWETPMPGQRYTQFQAGVQLANRVGALNE HCCCCCEEECCCHHCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCH IEFSEFVLKAQGFADAINATPDFPDMLHEVGRARELDQFASDHDAQLAFCLRARHAAWSP HHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC GYVQQNALRQGFTPGAMPGRLVLPAGGQGLPPVLTLSYDTQAALSEDPEQSAIRDITLSL CHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHEEE DVAQVHRSEQPFARLREVAASLGQAMDGVLCDQNGTPLPAMTMDPIAADLELLYDKLDSR EHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC ELSAGSVLARRLFS CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA