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The map label for this gene is cirA [C]

Identifier: 120611471

GI number: 120611471

Start: 3081565

End: 3083706

Strand: Reverse

Name: cirA [C]

Synonym: Aave_2807

Alternate gene names: 120611471

Gene position: 3083706-3081565 (Counterclockwise)

Preceding gene: 120611472

Following gene: 120611468

Centisome position: 57.61

GC content: 71.8

Gene sequence:

>2142_bases
ATGAATCCCATCGCTTTTTCCTTCCCGGGCCGTTCCGGCCGCGCAGCGCTGCATCCGCTCGCCTGTGCCGTGCTGCTGCT
GGCAGCCTCCGGTACCCGCGCGCAAACGGCCGCAGACGCCGCCTCCGCCGCGCCCCGGGCGCGCCTGCCCGAGGTGACCG
TCACCGGCAATCCGCTGGGAGCCGACACGGTGGTCGTCCCCGCCGCCCAGCTGTCCGGCGACGACCTCACCCTGCGCACC
GAATCGACCCTCGGCCAGACGCTGGACGGCATGCCGGGCGTCAGCAGCACCTACTTCGGCCCCAACGCCAGCCGGCCCAT
CATCCGCGGGCTGGACGGCGACCGCATCCGCGTGCTGCAGAACAGCGGCGCCACGCTGGACGCATCGGCGCTGAGCTTCG
ACCATGCCGTGCCCACCGAGGCCCTGACCACCGAACGCATCGAGGTGCTGCGCGGCCCGGCGGCGCTGCTCTATGGCGGC
AGCGCGGTGGGTGGCGTCGTGAACGTCATCGACAACCGCATCCCGCGCGAGCCGTTGAACGGCGTGGACGGCAAGGCCGA
AGCCTCGGCCGCCACCGGCAATGGAGAACGCGCGGGCGCGGCGATGGTGGAGGGCGGCAACGACCGCTTCGCCCTGCATG
CCGACGTGTTCGACCGCAATACGGACGATGTGCGCGTGCCCATCGACCTGGCCTGCTCGAAGCCTGGCTCTCCCGGCCTG
GCACGGCGCATCTGCAACTCCGCCAGCCACACGCGCGGCGGCGCCGTGGGCGGGACGGCGTTCTTCGACCAGGGCTACCT
GGGCCTGTCGGCAAGTACCTACCGCAGCGACTACGGCACCGTGGCCGAGGACGACGTGACGATCGGCATGCGTTCCAACC
GCTATGCGCTGGACGGACTGTGGCGTCTCGGCGCGGGCCCGCTGCAAAGCGTGCGCGTGCAGGCCAGCCACACGCACTAC
CGCCACACCGAATACGAAGGCGGCGAGCCCGGCACCACCTTCCGCAACGGTGGCAACGACCTGCGGGTGGAGGCGCGGCA
CGCACCCATCGGCCGGCTGCAGGGCGTCATCGGCCTGCAGGCCGAGGCCACCCGATTCTCGGCCGAGGGGAAGGAGGCTT
TCGCGCCCCGCAGCCGCAGCCGCAGCACCGCGCTGTTCCTGTACGAAGAGCTGGGCATGGACTGGGGCAAGCTGACCTTC
GGCGCCCGCGCGGAGCGCGACACGGTCGAGTCCTTCGGCAGCCCGGAAGTGGACCGCTTCGCCGTCGGCAAGCACGATTT
CCACCCGCACAGCGCCGCCGTGGGCGCGCTGTTCAACCTCACGCCCGCCTGGCAGCTCACTTCCAACCTGTCGTACACCC
AGCGCGCGCCCAAGGACTATGAACTGTTCGCCAACGGCCCGCACGTGGCCACGGGGGCCTGGGAGACGGGCGATCCGGGG
CTGGGCCTGGAAAAGGCCACCAGCGTGGACGTGGGAGCTGCGTGGAAGAGCGGCCCCAACCGCTTCGCCGCCACGGCCTT
CCTGAGCCAGTTCTCCAACTACATCGGCCTGGCGCCCACCGGGCTGCTGCGCTCGGAGGAGGGCGACGTGGTGCCGGCCG
GAACGGACGGCGCGCTGCCCGAGTACCGCTACCAGGGCGTGCGCGCGCGCTTCCACGGCCTGGAGGCCAGCGGCAGCGTG
CGGCTGGTGGGTGAAAGCGGGGTGGTGGCCCCGGCGTCCCGCCTGCTCGGCGACGGCTCGACGCTGGACCTGCAGCTGCG
CGGCGACATCGTGCGCGCCACCAACCGCGATACCGGCCAGCCGCTGCCGCGCATCGCGCCCCTGCGCCTGGGCAGCACGC
TGCTGTGGGCGAGCGGCCCCTGGCGCGCAGGGCTCGGTTTCGACTACCTGGCCGCCCAGGACCGCGTGCCCGACGACGGC
ACGCGCGCGACCGGCGCCTACACGCTGTGGAACGCCTCGCTCGGCTACCGCACGCAGTGGCAGTTCGGCGGCACCCGCAG
CACCGCGCTGTGGTACGCACGGCTGGACAACATCACGGACAAGCTGGCCTACAGCCCGACATCGATCCTGACGACCACGG
CGTTCCCGAAAGCGCCGTTGCCAGGGCGCAGCCTGAAGGTGGGGGTGAAGGTGGACTTCTGA

Upstream 100 bases:

>100_bases
GGTTCCTTCTTTTCGCCCGCCGTGGCGCCTGCATGTCTGCACCGGGCATGCGGGCGCCACGCGCGTGCGCCGTGTTCCCT
TTCTCCCTTTTTCGTCCGCC

Downstream 100 bases:

>100_bases
CGCGTCGGGCCGCCCTGCGGCTTAGAAGTCCGCGACCTTGCCCCACGCCGAGTGCCTGAACCGCTCGGGGTCGTAGGGGC
GGGGATCGAAGAGGGGCGTG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MNPIAFSFPGRSGRAALHPLACAVLLLAASGTRAQTAADAASAAPRARLPEVTVTGNPLGADTVVVPAAQLSGDDLTLRT
ESTLGQTLDGMPGVSSTYFGPNASRPIIRGLDGDRIRVLQNSGATLDASALSFDHAVPTEALTTERIEVLRGPAALLYGG
SAVGGVVNVIDNRIPREPLNGVDGKAEASAATGNGERAGAAMVEGGNDRFALHADVFDRNTDDVRVPIDLACSKPGSPGL
ARRICNSASHTRGGAVGGTAFFDQGYLGLSASTYRSDYGTVAEDDVTIGMRSNRYALDGLWRLGAGPLQSVRVQASHTHY
RHTEYEGGEPGTTFRNGGNDLRVEARHAPIGRLQGVIGLQAEATRFSAEGKEAFAPRSRSRSTALFLYEELGMDWGKLTF
GARAERDTVESFGSPEVDRFAVGKHDFHPHSAAVGALFNLTPAWQLTSNLSYTQRAPKDYELFANGPHVATGAWETGDPG
LGLEKATSVDVGAAWKSGPNRFAATAFLSQFSNYIGLAPTGLLRSEEGDVVPAGTDGALPEYRYQGVRARFHGLEASGSV
RLVGESGVVAPASRLLGDGSTLDLQLRGDIVRATNRDTGQPLPRIAPLRLGSTLLWASGPWRAGLGFDYLAAQDRVPDDG
TRATGAYTLWNASLGYRTQWQFGGTRSTALWYARLDNITDKLAYSPTSILTTTAFPKAPLPGRSLKVGVKVDF

Sequences:

>Translated_713_residues
MNPIAFSFPGRSGRAALHPLACAVLLLAASGTRAQTAADAASAAPRARLPEVTVTGNPLGADTVVVPAAQLSGDDLTLRT
ESTLGQTLDGMPGVSSTYFGPNASRPIIRGLDGDRIRVLQNSGATLDASALSFDHAVPTEALTTERIEVLRGPAALLYGG
SAVGGVVNVIDNRIPREPLNGVDGKAEASAATGNGERAGAAMVEGGNDRFALHADVFDRNTDDVRVPIDLACSKPGSPGL
ARRICNSASHTRGGAVGGTAFFDQGYLGLSASTYRSDYGTVAEDDVTIGMRSNRYALDGLWRLGAGPLQSVRVQASHTHY
RHTEYEGGEPGTTFRNGGNDLRVEARHAPIGRLQGVIGLQAEATRFSAEGKEAFAPRSRSRSTALFLYEELGMDWGKLTF
GARAERDTVESFGSPEVDRFAVGKHDFHPHSAAVGALFNLTPAWQLTSNLSYTQRAPKDYELFANGPHVATGAWETGDPG
LGLEKATSVDVGAAWKSGPNRFAATAFLSQFSNYIGLAPTGLLRSEEGDVVPAGTDGALPEYRYQGVRARFHGLEASGSV
RLVGESGVVAPASRLLGDGSTLDLQLRGDIVRATNRDTGQPLPRIAPLRLGSTLLWASGPWRAGLGFDYLAAQDRVPDDG
TRATGAYTLWNASLGYRTQWQFGGTRSTALWYARLDNITDKLAYSPTSILTTTAFPKAPLPGRSLKVGVKVDF
>Mature_713_residues
MNPIAFSFPGRSGRAALHPLACAVLLLAASGTRAQTAADAASAAPRARLPEVTVTGNPLGADTVVVPAAQLSGDDLTLRT
ESTLGQTLDGMPGVSSTYFGPNASRPIIRGLDGDRIRVLQNSGATLDASALSFDHAVPTEALTTERIEVLRGPAALLYGG
SAVGGVVNVIDNRIPREPLNGVDGKAEASAATGNGERAGAAMVEGGNDRFALHADVFDRNTDDVRVPIDLACSKPGSPGL
ARRICNSASHTRGGAVGGTAFFDQGYLGLSASTYRSDYGTVAEDDVTIGMRSNRYALDGLWRLGAGPLQSVRVQASHTHY
RHTEYEGGEPGTTFRNGGNDLRVEARHAPIGRLQGVIGLQAEATRFSAEGKEAFAPRSRSRSTALFLYEELGMDWGKLTF
GARAERDTVESFGSPEVDRFAVGKHDFHPHSAAVGALFNLTPAWQLTSNLSYTQRAPKDYELFANGPHVATGAWETGDPG
LGLEKATSVDVGAAWKSGPNRFAATAFLSQFSNYIGLAPTGLLRSEEGDVVPAGTDGALPEYRYQGVRARFHGLEASGSV
RLVGESGVVAPASRLLGDGSTLDLQLRGDIVRATNRDTGQPLPRIAPLRLGSTLLWASGPWRAGLGFDYLAAQDRVPDDG
TRATGAYTLWNASLGYRTQWQFGGTRSTALWYARLDNITDKLAYSPTSILTTTAFPKAPLPGRSLKVGVKVDF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 75294; Mature: 75294

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIAFSFPGRSGRAALHPLACAVLLLAASGTRAQTAADAASAAPRARLPEVTVTGNPLG
CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC
ADTVVVPAAQLSGDDLTLRTESTLGQTLDGMPGVSSTYFGPNASRPIIRGLDGDRIRVLQ
CCEEEEEHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEE
NSGATLDASALSFDHAVPTEALTTERIEVLRGPAALLYGGSAVGGVVNVIDNRIPREPLN
CCCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCC
GVDGKAEASAATGNGERAGAAMVEGGNDRFALHADVFDRNTDDVRVPIDLACSKPGSPGL
CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCHH
ARRICNSASHTRGGAVGGTAFFDQGYLGLSASTYRSDYGTVAEDDVTIGMRSNRYALDGL
HHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCEEEHHH
WRLGAGPLQSVRVQASHTHYRHTEYEGGEPGTTFRNGGNDLRVEARHAPIGRLQGVIGLQ
HHCCCCCHHHEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCEEECC
AEATRFSAEGKEAFAPRSRSRSTALFLYEELGMDWGKLTFGARAERDTVESFGSPEVDRF
CCHHEECCCCCHHCCCCCCCCCEEEEEEHHHCCCHHHEEECCCCCHHHHHHCCCCCCCEE
AVGKHDFHPHSAAVGALFNLTPAWQLTSNLSYTQRAPKDYELFANGPHVATGAWETGDPG
ECCCCCCCCCHHHHHHHHCCCCCHHHHCCCCHHHCCCCCCEEEECCCEEEECCCCCCCCC
LGLEKATSVDVGAAWKSGPNRFAATAFLSQFSNYIGLAPTGLLRSEEGDVVPAGTDGALP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCCCCCC
EYRYQGVRARFHGLEASGSVRLVGESGVVAPASRLLGDGSTLDLQLRGDIVRATNRDTGQ
HHHHHCHHHEEECCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCC
PLPRIAPLRLGSTLLWASGPWRAGLGFDYLAAQDRVPDDGTRATGAYTLWNASLGYRTQW
CCCCCCCEECCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEE
QFGGTRSTALWYARLDNITDKLAYSPTSILTTTAFPKAPLPGRSLKVGVKVDF
ECCCCCCEEEEEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNPIAFSFPGRSGRAALHPLACAVLLLAASGTRAQTAADAASAAPRARLPEVTVTGNPLG
CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC
ADTVVVPAAQLSGDDLTLRTESTLGQTLDGMPGVSSTYFGPNASRPIIRGLDGDRIRVLQ
CCEEEEEHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEE
NSGATLDASALSFDHAVPTEALTTERIEVLRGPAALLYGGSAVGGVVNVIDNRIPREPLN
CCCCEEEHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCC
GVDGKAEASAATGNGERAGAAMVEGGNDRFALHADVFDRNTDDVRVPIDLACSKPGSPGL
CCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCHH
ARRICNSASHTRGGAVGGTAFFDQGYLGLSASTYRSDYGTVAEDDVTIGMRSNRYALDGL
HHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCEEEHHH
WRLGAGPLQSVRVQASHTHYRHTEYEGGEPGTTFRNGGNDLRVEARHAPIGRLQGVIGLQ
HHCCCCCHHHEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCEEECC
AEATRFSAEGKEAFAPRSRSRSTALFLYEELGMDWGKLTFGARAERDTVESFGSPEVDRF
CCHHEECCCCCHHCCCCCCCCCEEEEEEHHHCCCHHHEEECCCCCHHHHHHCCCCCCCEE
AVGKHDFHPHSAAVGALFNLTPAWQLTSNLSYTQRAPKDYELFANGPHVATGAWETGDPG
ECCCCCCCCCHHHHHHHHCCCCCHHHHCCCCHHHCCCCCCEEEECCCEEEECCCCCCCCC
LGLEKATSVDVGAAWKSGPNRFAATAFLSQFSNYIGLAPTGLLRSEEGDVVPAGTDGALP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCCCCCC
EYRYQGVRARFHGLEASGSVRLVGESGVVAPASRLLGDGSTLDLQLRGDIVRATNRDTGQ
HHHHHCHHHEEECCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCC
PLPRIAPLRLGSTLLWASGPWRAGLGFDYLAAQDRVPDDGTRATGAYTLWNASLGYRTQW
CCCCCCCEECCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEE
QFGGTRSTALWYARLDNITDKLAYSPTSILTTTAFPKAPLPGRSLKVGVKVDF
ECCCCCCEEEEEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]