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The map label for this gene is yiaN [H]

Identifier: 120611459

GI number: 120611459

Start: 3068855

End: 3070135

Strand: Reverse

Name: yiaN [H]

Synonym: Aave_2795

Alternate gene names: 120611459

Gene position: 3070135-3068855 (Counterclockwise)

Preceding gene: 120611460

Following gene: 120611458

Centisome position: 57.36

GC content: 66.9

Gene sequence:

>1281_bases
ATGGTCGTGACCCTGATTTTTCTCGGCGTGCTGATCGGCGGCATGGCCATCGGCATGCCGATCGCCCAGTCGCTGATCCT
CACCGGCGTCGCCCTGATGTGGCACCTGGACTTCTTCGATTCCCAGTTGCTCGCGCAGAACCTGCAGGCGGGCTTCGACA
ACTTCCCATTGCTGGCGGTGCCGTTCTTCATCCTGGCCGGCGAACTGATGAACGCCGGCGGGCTCTCGCGCCGCATCATC
GACCTGGCGCGCGCCTTCGTCGGGCACATCCGCGGCGGCCTGGGCTTCGTGGCCATCGGCGCGGCGGTGCTGCTCGCGTC
GATGAGCGGCTCGGCCATCGCCGACACGGCAGCGCTCGCCACCATCCTGCTGCCCATGATGCGCCAGCAGAACTATCCGT
CCAGCTACAGCGCCGGCCTGCTGGCCTCGGGCGGCATCATCGCGCCGATCATTCCGCCCTCGATGCCGTTCGTGATCTAC
GGCGTGACCACCAACACCTCCATCAGCAAGCTGTTCCTGGCGGGCGTGTTCCCCGGGCTGATGATGGGCACCTTCCTCAT
CCTCGCCTGGTGGTGGATCGCGCGCAGGCACCGGCTGCCGGCCATGGAGCGCGTGGCCTGGGGCGCGCGGATGCGCGCGC
TGCTGCACAGCTTCTGGGCCATGATGATGCCGGTCATCATCCTCGGCGGGCTCAAGGGCGGCATCTTCACGCCCACCGAG
GCCGCCGTGGTGGCCGCCGTGTACGCGCTCATCGTCTCGATGTTCGTCTATCGCGAGATGACGTGGGGCCGGCTCTACGA
AGTGTTCCTCGCCGCGGGCAAGACCACCGCGGTGGTGATGTTCCTCTGCGGCGCGGCCACCGTGACGGCCTACATGATCA
CCCTGGCGGACCTGCCCAACCTGCTGGCCGACAGCTTCGCGGGCGTCATGGGCAACCCCATGCTGTTCATGGCGCTGATG
ATGGTGTTCCTGCTGGTGGTCGGCACGGCCATGGATCTCACGCCCACCATCCTGATCTTCGGCCCCGTGTGCGTGCCGCT
CGCCGTCAAGGCCGGCATCGATCCGGTGTACTTCGGCTTCATGTTCATCTACGTGGGCTGCGTGGGGCTCATCACGCCGC
CCGTGGGCACGGTGCAGAACGTGGTGGCCGGCGTGGGCCGGCTGCGCATGGAGACCGTCATCCGCGGCACCACGCCGTTC
CTGCTGGTGTACGTGCTGCTGCTGATCCTGTTCGTGATCTTCCCGCAGATGATCACCGCGCCGCTGGGCTGGCTGCATTG
A

Upstream 100 bases:

>100_bases
GCGGCGGGCCTGCTCGCGGCACTGGTGCTGGATCTGGTGCGCGGCCGGCCGGCCGGCGAGGATGCGGGCGGCGACGCCAC
CATCGAGTGAAGGAGCGGCC

Downstream 100 bases:

>100_bases
GCCCGGCATGCCGTCCATCGTTCATGCCGATCCGCTTTCCCCTGTTTTTCGCTGCTTTCCCGTTTTATTCCAGGAGACAA
ACACCATGCGCATCCGTTTC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MVVTLIFLGVLIGGMAIGMPIAQSLILTGVALMWHLDFFDSQLLAQNLQAGFDNFPLLAVPFFILAGELMNAGGLSRRII
DLARAFVGHIRGGLGFVAIGAAVLLASMSGSAIADTAALATILLPMMRQQNYPSSYSAGLLASGGIIAPIIPPSMPFVIY
GVTTNTSISKLFLAGVFPGLMMGTFLILAWWWIARRHRLPAMERVAWGARMRALLHSFWAMMMPVIILGGLKGGIFTPTE
AAVVAAVYALIVSMFVYREMTWGRLYEVFLAAGKTTAVVMFLCGAATVTAYMITLADLPNLLADSFAGVMGNPMLFMALM
MVFLLVVGTAMDLTPTILIFGPVCVPLAVKAGIDPVYFGFMFIYVGCVGLITPPVGTVQNVVAGVGRLRMETVIRGTTPF
LLVYVLLLILFVIFPQMITAPLGWLH

Sequences:

>Translated_426_residues
MVVTLIFLGVLIGGMAIGMPIAQSLILTGVALMWHLDFFDSQLLAQNLQAGFDNFPLLAVPFFILAGELMNAGGLSRRII
DLARAFVGHIRGGLGFVAIGAAVLLASMSGSAIADTAALATILLPMMRQQNYPSSYSAGLLASGGIIAPIIPPSMPFVIY
GVTTNTSISKLFLAGVFPGLMMGTFLILAWWWIARRHRLPAMERVAWGARMRALLHSFWAMMMPVIILGGLKGGIFTPTE
AAVVAAVYALIVSMFVYREMTWGRLYEVFLAAGKTTAVVMFLCGAATVTAYMITLADLPNLLADSFAGVMGNPMLFMALM
MVFLLVVGTAMDLTPTILIFGPVCVPLAVKAGIDPVYFGFMFIYVGCVGLITPPVGTVQNVVAGVGRLRMETVIRGTTPF
LLVYVLLLILFVIFPQMITAPLGWLH
>Mature_426_residues
MVVTLIFLGVLIGGMAIGMPIAQSLILTGVALMWHLDFFDSQLLAQNLQAGFDNFPLLAVPFFILAGELMNAGGLSRRII
DLARAFVGHIRGGLGFVAIGAAVLLASMSGSAIADTAALATILLPMMRQQNYPSSYSAGLLASGGIIAPIIPPSMPFVIY
GVTTNTSISKLFLAGVFPGLMMGTFLILAWWWIARRHRLPAMERVAWGARMRALLHSFWAMMMPVIILGGLKGGIFTPTE
AAVVAAVYALIVSMFVYREMTWGRLYEVFLAAGKTTAVVMFLCGAATVTAYMITLADLPNLLADSFAGVMGNPMLFMALM
MVFLLVVGTAMDLTPTILIFGPVCVPLAVKAGIDPVYFGFMFIYVGCVGLITPPVGTVQNVVAGVGRLRMETVIRGTTPF
LLVYVLLLILFVIFPQMITAPLGWLH

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system yiaMNO involved in the uptake of 2,3- diketo-L-gulonate [H]

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=426, Percent_Identity=54.9295774647887, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45668; Mature: 45668

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVTLIFLGVLIGGMAIGMPIAQSLILTGVALMWHLDFFDSQLLAQNLQAGFDNFPLLAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
PFFILAGELMNAGGLSRRIIDLARAFVGHIRGGLGFVAIGAAVLLASMSGSAIADTAALA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
TILLPMMRQQNYPSSYSAGLLASGGIIAPIIPPSMPFVIYGVTTNTSISKLFLAGVFPGL
HHHHHHHHHCCCCCCCCCCHHCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
MMGTFLILAWWWIARRHRLPAMERVAWGARMRALLHSFWAMMMPVIILGGLKGGIFTPTE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AAVVAAVYALIVSMFVYREMTWGRLYEVFLAAGKTTAVVMFLCGAATVTAYMITLADLPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLADSFAGVMGNPMLFMALMMVFLLVVGTAMDLTPTILIFGPVCVPLAVKAGIDPVYFGF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
MFIYVGCVGLITPPVGTVQNVVAGVGRLRMETVIRGTTPFLLVYVLLLILFVIFPQMITA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
PLGWLH
CCCCCC
>Mature Secondary Structure
MVVTLIFLGVLIGGMAIGMPIAQSLILTGVALMWHLDFFDSQLLAQNLQAGFDNFPLLAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
PFFILAGELMNAGGLSRRIIDLARAFVGHIRGGLGFVAIGAAVLLASMSGSAIADTAALA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
TILLPMMRQQNYPSSYSAGLLASGGIIAPIIPPSMPFVIYGVTTNTSISKLFLAGVFPGL
HHHHHHHHHCCCCCCCCCCHHCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
MMGTFLILAWWWIARRHRLPAMERVAWGARMRALLHSFWAMMMPVIILGGLKGGIFTPTE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AAVVAAVYALIVSMFVYREMTWGRLYEVFLAAGKTTAVVMFLCGAATVTAYMITLADLPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLADSFAGVMGNPMLFMALMMVFLLVVGTAMDLTPTILIFGPVCVPLAVKAGIDPVYFGF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
MFIYVGCVGLITPPVGTVQNVVAGVGRLRMETVIRGTTPFLLVYVLLLILFVIFPQMITA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
PLGWLH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]