Click here to switch to the map view.

The map label for this gene is yiaO [H]

Identifier: 120611458

GI number: 120611458

Start: 3067753

End: 3068769

Strand: Reverse

Name: yiaO [H]

Synonym: Aave_2794

Alternate gene names: 120611458

Gene position: 3068769-3067753 (Counterclockwise)

Preceding gene: 120611459

Following gene: 120611457

Centisome position: 57.33

GC content: 66.47

Gene sequence:

>1017_bases
ATGCGCATCCGTTTCGCCCTCGCCACCCTCGTGGCCGCCATCGCCGCCAGCGGCGCGTCCGTCGCCCAGGCCCAGGACTT
CAAGCCGCGCATCGTGCGCTTCGGCTACGGCCTGGTGGACAACTCCAACCAGGGGCGCGCCGTGCGCTTCTTCGCCCAGG
AAGTCGAGAAGGCCACGGGCGGCAAGATGAAGGTGCGCGCCATCGGCAACGCCTCGCTGGGTTCCGACACGCAGATGCAG
CAGGCGCTCATCGGCGGCGCGCAGGAGATGATGGTCGGCTCCACCGCCACGCTGGTCGGCATCGTGCCCGAGATGGCCGT
GTGGGACACCCCCTTCCTCTTCGCCAACGTGAAGGAAGCCGACACGGTGCTCGACGGCCACGTCGGCGAGAAGGTGAAGG
CCAAGCTCGAACCCAAGGGCATGGTCGGCCTGGTCTATTGGGAGAACGGCTTCCGCAACCTCACCAACAGCAAGCGCCCC
GTCACCAGGCTGGAAGACATGGGCGACATCAAGCTGCGCGTGATGCAGAACAACGTCTTCCTCGACAGCTTCAAGGCCCT
GGGCGCCAACGCCGTGCCGCTGCCGTTCTCGGAGCTCTTCACCGCACTGGAGACGCGCGCCGTCGATGGCCAGGAGAACC
CGTTCAACACCGTGGTGTCGAGCAAGTTCTACGAGGTGCAGAAGTACCTCACCGTCACCAACCATGTCTATAGCCCGTGG
ATCGTCACGGTGAGCAAGAAGTGGTGGGATACCCTCAGCCCGGCCGAGAAGAAGGTGCTGCAGGACGCCGCCGCGAAGAG
CCGCGACTTCGAACGCAAGGACACGCGCGAGGAAGCCGCCAAGGCGCTGGCGGACCTGAAGACCAAGGGCATGCAGGTCA
ACGAACTGCCCGCGGCCGAGGCCAACCGCATGCGCGAGAAGCTCACGTCGGTGAACGCCGGCATCGCCAAGTCGGTGGGC
CAGGAGACCTGGGACGCGGTGCAGGCCGCCGTCCAGCAGGCCCGCGGCGGCCAGTAA

Upstream 100 bases:

>100_bases
GGCTGGCTGCATTGAGCCCGGCATGCCGTCCATCGTTCATGCCGATCCGCTTTCCCCTGTTTTTCGCTGCTTTCCCGTTT
TATTCCAGGAGACAAACACC

Downstream 100 bases:

>100_bases
GGCGCGAAGGCAGAGGAGGCGCGTGCGCTGTCGGGGCAGCAGCGCACGCCAGGCGGCAGGACAGGGCCTCATTCGGCCGA
ACCCGACCGTACGCGTCCGC

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: 2,3-DKG-binding protein; Extracytoplasmic solute receptor protein yiaO [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MRIRFALATLVAAIAASGASVAQAQDFKPRIVRFGYGLVDNSNQGRAVRFFAQEVEKATGGKMKVRAIGNASLGSDTQMQ
QALIGGAQEMMVGSTATLVGIVPEMAVWDTPFLFANVKEADTVLDGHVGEKVKAKLEPKGMVGLVYWENGFRNLTNSKRP
VTRLEDMGDIKLRVMQNNVFLDSFKALGANAVPLPFSELFTALETRAVDGQENPFNTVVSSKFYEVQKYLTVTNHVYSPW
IVTVSKKWWDTLSPAEKKVLQDAAAKSRDFERKDTREEAAKALADLKTKGMQVNELPAAEANRMREKLTSVNAGIAKSVG
QETWDAVQAAVQQARGGQ

Sequences:

>Translated_338_residues
MRIRFALATLVAAIAASGASVAQAQDFKPRIVRFGYGLVDNSNQGRAVRFFAQEVEKATGGKMKVRAIGNASLGSDTQMQ
QALIGGAQEMMVGSTATLVGIVPEMAVWDTPFLFANVKEADTVLDGHVGEKVKAKLEPKGMVGLVYWENGFRNLTNSKRP
VTRLEDMGDIKLRVMQNNVFLDSFKALGANAVPLPFSELFTALETRAVDGQENPFNTVVSSKFYEVQKYLTVTNHVYSPW
IVTVSKKWWDTLSPAEKKVLQDAAAKSRDFERKDTREEAAKALADLKTKGMQVNELPAAEANRMREKLTSVNAGIAKSVG
QETWDAVQAAVQQARGGQ
>Mature_338_residues
MRIRFALATLVAAIAASGASVAQAQDFKPRIVRFGYGLVDNSNQGRAVRFFAQEVEKATGGKMKVRAIGNASLGSDTQMQ
QALIGGAQEMMVGSTATLVGIVPEMAVWDTPFLFANVKEADTVLDGHVGEKVKAKLEPKGMVGLVYWENGFRNLTNSKRP
VTRLEDMGDIKLRVMQNNVFLDSFKALGANAVPLPFSELFTALETRAVDGQENPFNTVVSSKFYEVQKYLTVTNHVYSPW
IVTVSKKWWDTLSPAEKKVLQDAAAKSRDFERKDTREEAAKALADLKTKGMQVNELPAAEANRMREKLTSVNAGIAKSVG
QETWDAVQAAVQQARGGQ

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system yiaMNO involved in the uptake of 2,3- diketo-L-gulonate. This protein specifically binds 2,3-diketo-L- gulonate. Is not able to bind either L-ascorbate or dehydroascorbate [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=294, Percent_Identity=36.734693877551, Blast_Score=210, Evalue=9e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36948; Mature: 36948

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRFALATLVAAIAASGASVAQAQDFKPRIVRFGYGLVDNSNQGRAVRFFAQEVEKATG
CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCEECCCCCCHHHHHHHHHHHHHCC
GKMKVRAIGNASLGSDTQMQQALIGGAQEMMVGSTATLVGIVPEMAVWDTPFLFANVKEA
CCEEEEEECCCCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHCCCCHHEEECHHH
DTVLDGHVGEKVKAKLEPKGMVGLVYWENGFRNLTNSKRPVTRLEDMGDIKLRVMQNNVF
HHHHCCCCCCHHHCCCCCCCCEEEEEEECCHHHCCCCCCCHHHHHCCCCEEEEEEECCEE
LDSFKALGANAVPLPFSELFTALETRAVDGQENPFNTVVSSKFYEVQKYLTVTNHVYSPW
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
IVTVSKKWWDTLSPAEKKVLQDAAAKSRDFERKDTREEAAKALADLKTKGMQVNELPAAE
EEEECHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ANRMREKLTSVNAGIAKSVGQETWDAVQAAVQQARGGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIRFALATLVAAIAASGASVAQAQDFKPRIVRFGYGLVDNSNQGRAVRFFAQEVEKATG
CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCEECCCCCCHHHHHHHHHHHHHCC
GKMKVRAIGNASLGSDTQMQQALIGGAQEMMVGSTATLVGIVPEMAVWDTPFLFANVKEA
CCEEEEEECCCCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHCCCCHHEEECHHH
DTVLDGHVGEKVKAKLEPKGMVGLVYWENGFRNLTNSKRPVTRLEDMGDIKLRVMQNNVF
HHHHCCCCCCHHHCCCCCCCCEEEEEEECCHHHCCCCCCCHHHHHCCCCEEEEEEECCEE
LDSFKALGANAVPLPFSELFTALETRAVDGQENPFNTVVSSKFYEVQKYLTVTNHVYSPW
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
IVTVSKKWWDTLSPAEKKVLQDAAAKSRDFERKDTREEAAKALADLKTKGMQVNELPAAE
EEEECHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ANRMREKLTSVNAGIAKSVGQETWDAVQAAVQQARGGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]