Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611407

Identifier: 120611407

GI number: 120611407

Start: 3017083

End: 3017856

Strand: Direct

Name: 120611407

Synonym: Aave_2743

Alternate gene names: NA

Gene position: 3017083-3017856 (Clockwise)

Preceding gene: 120611406

Following gene: 120611408

Centisome position: 56.36

GC content: 63.57

Gene sequence:

>774_bases
ATGGACCAGCACGCAAATACCCACGGTGCATCCATCACCGACAGAGGCTCTGCAAGATTGCTGGCCGTCGTGGAGGTCGA
GAAGGAGCAGCGGATCCGCTGCCAGCAGCCGGGGTGCAACCACACCGTGTACAAGGCGATCCATGTCGTGGACGAGCAGG
GCACTTTGCTGGTGCTCGGCTCCACCTGCTTCGCGAAGCAGTATGGGTCTCCCACGAAACTCGGCGATCCTGCGTATGGC
AATGGCGGGGGGCGAGTGCTGACGAGCGAAGAGCGACAGATGCTGCAGGACAACACTCGCGCGTTCATCGAGCGTTTCGC
GAAGGAATACCTGGCTCACCGGGCGGCCGCGCAGGCCAAGCTGCAATCGATGCGCGCCAGGCCAGTGCCGGCGTATGCCA
ACTTCGCCTCCTGGCCTCATCCACTGATTCGCCAGAAGCCGTCACCGGAGCCGGCCATGGCGCCCGCAAGGCCAGGGCCC
TGGCCATGGATGAAACCCAGGACGTCTATGGCTTATTTCAAGCTCAAGGATGGCTCAGCATGGGTGCGCGTCGAACGCCA
CGATGGACAGCAGATGCTGGCACCGCTGCCAGTGTTTGAAGGGTGGGACGAGGCACTGCCGGCGTTGTGCGGGACCGCGG
ACCTGGAGCACACCGCCTATGTGGTGCCGGACATCAGGCGCGCGATCGCGTACCTTCGGGAGCGCGCCGTCGTGACGCTG
GTCACAGGTGTCTGGAAGGACATCGCAGGGAAGTCTGCCGAGACTTCTTGGTAG

Upstream 100 bases:

>100_bases
GTCCCCAAGCGCCTAAGCAGGGCAATCCGCTGGCCCACTTGCCGTTACGCGTCCTTCACGTTTGCGCAGGTACCATAACG
CAAAACGATAGGAGGGAAGA

Downstream 100 bases:

>100_bases
CAGCGCGCCACTGCTGCCACAACGATCCCCTATCGAGATCTGTAGCAACCACTGCACATTCCATTCGTGAACATGGTCCA
CCAAAGCCCTGCGCTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLGSTCFAKQYGSPTKLGDPAYG
NGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAKLQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGP
WPWMKPRTSMAYFKLKDGSAWVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL
VTGVWKDIAGKSAETSW

Sequences:

>Translated_257_residues
MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLGSTCFAKQYGSPTKLGDPAYG
NGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAKLQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGP
WPWMKPRTSMAYFKLKDGSAWVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL
VTGVWKDIAGKSAETSW
>Mature_257_residues
MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLGSTCFAKQYGSPTKLGDPAYG
NGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAKLQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGP
WPWMKPRTSMAYFKLKDGSAWVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL
VTGVWKDIAGKSAETSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28557; Mature: 28557

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLG
CCCCCCCCCCCCCCCCCCEEEEEEEECCHHCCCCCCCCCCHHHHHHEEEECCCCCEEEEC
STCFAKQYGSPTKLGDPAYGNGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAK
CHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGPWPWMKPRTSMAYFKLKDGSA
HHHHHCCCCCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE
WVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL
EEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHH
VTGVWKDIAGKSAETSW
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLG
CCCCCCCCCCCCCCCCCCEEEEEEEECCHHCCCCCCCCCCHHHHHHEEEECCCCCEEEEC
STCFAKQYGSPTKLGDPAYGNGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAK
CHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGPWPWMKPRTSMAYFKLKDGSA
HHHHHCCCCCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE
WVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL
EEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHH
VTGVWKDIAGKSAETSW
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA