| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611407
Identifier: 120611407
GI number: 120611407
Start: 3017083
End: 3017856
Strand: Direct
Name: 120611407
Synonym: Aave_2743
Alternate gene names: NA
Gene position: 3017083-3017856 (Clockwise)
Preceding gene: 120611406
Following gene: 120611408
Centisome position: 56.36
GC content: 63.57
Gene sequence:
>774_bases ATGGACCAGCACGCAAATACCCACGGTGCATCCATCACCGACAGAGGCTCTGCAAGATTGCTGGCCGTCGTGGAGGTCGA GAAGGAGCAGCGGATCCGCTGCCAGCAGCCGGGGTGCAACCACACCGTGTACAAGGCGATCCATGTCGTGGACGAGCAGG GCACTTTGCTGGTGCTCGGCTCCACCTGCTTCGCGAAGCAGTATGGGTCTCCCACGAAACTCGGCGATCCTGCGTATGGC AATGGCGGGGGGCGAGTGCTGACGAGCGAAGAGCGACAGATGCTGCAGGACAACACTCGCGCGTTCATCGAGCGTTTCGC GAAGGAATACCTGGCTCACCGGGCGGCCGCGCAGGCCAAGCTGCAATCGATGCGCGCCAGGCCAGTGCCGGCGTATGCCA ACTTCGCCTCCTGGCCTCATCCACTGATTCGCCAGAAGCCGTCACCGGAGCCGGCCATGGCGCCCGCAAGGCCAGGGCCC TGGCCATGGATGAAACCCAGGACGTCTATGGCTTATTTCAAGCTCAAGGATGGCTCAGCATGGGTGCGCGTCGAACGCCA CGATGGACAGCAGATGCTGGCACCGCTGCCAGTGTTTGAAGGGTGGGACGAGGCACTGCCGGCGTTGTGCGGGACCGCGG ACCTGGAGCACACCGCCTATGTGGTGCCGGACATCAGGCGCGCGATCGCGTACCTTCGGGAGCGCGCCGTCGTGACGCTG GTCACAGGTGTCTGGAAGGACATCGCAGGGAAGTCTGCCGAGACTTCTTGGTAG
Upstream 100 bases:
>100_bases GTCCCCAAGCGCCTAAGCAGGGCAATCCGCTGGCCCACTTGCCGTTACGCGTCCTTCACGTTTGCGCAGGTACCATAACG CAAAACGATAGGAGGGAAGA
Downstream 100 bases:
>100_bases CAGCGCGCCACTGCTGCCACAACGATCCCCTATCGAGATCTGTAGCAACCACTGCACATTCCATTCGTGAACATGGTCCA CCAAAGCCCTGCGCTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLGSTCFAKQYGSPTKLGDPAYG NGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAKLQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGP WPWMKPRTSMAYFKLKDGSAWVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL VTGVWKDIAGKSAETSW
Sequences:
>Translated_257_residues MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLGSTCFAKQYGSPTKLGDPAYG NGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAKLQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGP WPWMKPRTSMAYFKLKDGSAWVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL VTGVWKDIAGKSAETSW >Mature_257_residues MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLGSTCFAKQYGSPTKLGDPAYG NGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAKLQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGP WPWMKPRTSMAYFKLKDGSAWVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL VTGVWKDIAGKSAETSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28557; Mature: 28557
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLG CCCCCCCCCCCCCCCCCCEEEEEEEECCHHCCCCCCCCCCHHHHHHEEEECCCCCEEEEC STCFAKQYGSPTKLGDPAYGNGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAK CHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGPWPWMKPRTSMAYFKLKDGSA HHHHHCCCCCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE WVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL EEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHH VTGVWKDIAGKSAETSW HHHHHHHHCCCCCCCCC >Mature Secondary Structure MDQHANTHGASITDRGSARLLAVVEVEKEQRIRCQQPGCNHTVYKAIHVVDEQGTLLVLG CCCCCCCCCCCCCCCCCCEEEEEEEECCHHCCCCCCCCCCHHHHHHEEEECCCCCEEEEC STCFAKQYGSPTKLGDPAYGNGGGRVLTSEERQMLQDNTRAFIERFAKEYLAHRAAAQAK CHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSMRARPVPAYANFASWPHPLIRQKPSPEPAMAPARPGPWPWMKPRTSMAYFKLKDGSA HHHHHCCCCCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE WVRVERHDGQQMLAPLPVFEGWDEALPALCGTADLEHTAYVVPDIRRAIAYLRERAVVTL EEEEEECCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHH VTGVWKDIAGKSAETSW HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA