| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611406
Identifier: 120611406
GI number: 120611406
Start: 3016116
End: 3016958
Strand: Direct
Name: 120611406
Synonym: Aave_2742
Alternate gene names: NA
Gene position: 3016116-3016958 (Clockwise)
Preceding gene: 120611405
Following gene: 120611407
Centisome position: 56.35
GC content: 57.77
Gene sequence:
>843_bases TTGAACTCAGGAAGTTCTGAGAGCATCCTACGCTCTCGGCTTCCATCCGTTTACATGGTTGTTCCGAAACCTCCGAAGAT CTACGGACTGATCCCCAGGTACGAAAGCGGAAAGCTGCTGCGTTGGTCGGTATCCATCACACGTCGCGGTAAGCACTTCG ACAAAGAGTTCCGGGTCGCTACTTATGGTGATCCGGAAAAGGCCAAAGCCGCAGCCATCGCCTATCGCGACGAACTTCTG AAGAAGGTTCCGGCGATGAGCCGACGCGAGTTCGGAACGATCGTCCGCAGCAACAACACGTCTGGCATTCCAGGCGTATC GCGCCGTGAGGAAAACGGCTATGCCAGATGGTCTGCACTTGTTTCTTTGCCCGACGGTACGACACGCAGACGGACCTTTG CTGTGGTGAAGTACGGCGAGGAGGTAGCCCGCCAAAAGGCCATCGAAGCACGGAGCGAATTGCTCAAGTTGCTTGATGGC TGGTTTGTCCATCATCCTGATGCCGTTCCACTTGGTCAAACTCCCTCCGCTGTTGTTCCAATCGTCATGCCTAAGCGTGA AAGGAGCCTAGCGAAGGGTAAGCGTCAGCCATCGCCAGAGAAGCGGGTCTACCGTATGGAGATCAAGTGGAGCCTGCGCA GCGGCGTGCAGGTTTGCCGCGACTATTGGGTGGCGGAATGCGCGGTACCGACCGGGGGCACCCGGCGTAGGCAGTTTTCC GTAGCCGAGTACGGCGAGGACGGGGCCCGGCGTCTTGCCTTTGAACAACGCCGCGAGTGGCTCGAGCATCCGCCAGAGCT GTCGCGCAAACGAGCACAGCGGAAGAACACACACAGTATGTAA
Upstream 100 bases:
>100_bases TTGATTTCAACGAAAAAAATAACATTGAATTTCATATGTTCGAAGTCATGTAACGACTTGAACATCACCGCCGCAGCAAG CGGCAAGTCTGTTTGACTAA
Downstream 100 bases:
>100_bases TGCTCGCGATGGTATAGGAGTCCAGTCCCCAAGCGCCTAAGCAGGGCAATCCGCTGGCCCACTTGCCGTTACGCGTCCTT CACGTTTGCGCAGGTACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MNSGSSESILRSRLPSVYMVVPKPPKIYGLIPRYESGKLLRWSVSITRRGKHFDKEFRVATYGDPEKAKAAAIAYRDELL KKVPAMSRREFGTIVRSNNTSGIPGVSRREENGYARWSALVSLPDGTTRRRTFAVVKYGEEVARQKAIEARSELLKLLDG WFVHHPDAVPLGQTPSAVVPIVMPKRERSLAKGKRQPSPEKRVYRMEIKWSLRSGVQVCRDYWVAECAVPTGGTRRRQFS VAEYGEDGARRLAFEQRREWLEHPPELSRKRAQRKNTHSM
Sequences:
>Translated_280_residues MNSGSSESILRSRLPSVYMVVPKPPKIYGLIPRYESGKLLRWSVSITRRGKHFDKEFRVATYGDPEKAKAAAIAYRDELL KKVPAMSRREFGTIVRSNNTSGIPGVSRREENGYARWSALVSLPDGTTRRRTFAVVKYGEEVARQKAIEARSELLKLLDG WFVHHPDAVPLGQTPSAVVPIVMPKRERSLAKGKRQPSPEKRVYRMEIKWSLRSGVQVCRDYWVAECAVPTGGTRRRQFS VAEYGEDGARRLAFEQRREWLEHPPELSRKRAQRKNTHSM >Mature_280_residues MNSGSSESILRSRLPSVYMVVPKPPKIYGLIPRYESGKLLRWSVSITRRGKHFDKEFRVATYGDPEKAKAAAIAYRDELL KKVPAMSRREFGTIVRSNNTSGIPGVSRREENGYARWSALVSLPDGTTRRRTFAVVKYGEEVARQKAIEARSELLKLLDG WFVHHPDAVPLGQTPSAVVPIVMPKRERSLAKGKRQPSPEKRVYRMEIKWSLRSGVQVCRDYWVAECAVPTGGTRRRQFS VAEYGEDGARRLAFEQRREWLEHPPELSRKRAQRKNTHSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32020; Mature: 32020
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSGSSESILRSRLPSVYMVVPKPPKIYGLIPRYESGKLLRWSVSITRRGKHFDKEFRVA CCCCCHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEE TYGDPEKAKAAAIAYRDELLKKVPAMSRREFGTIVRSNNTSGIPGVSRREENGYARWSAL ECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEE VSLPDGTTRRRTFAVVKYGEEVARQKAIEARSELLKLLDGWFVHHPDAVPLGQTPSAVVP EECCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEE IVMPKRERSLAKGKRQPSPEKRVYRMEIKWSLRSGVQVCRDYWVAECAVPTGGTRRRQFS EEECCHHHHHHHCCCCCCHHHEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEE VAEYGEDGARRLAFEQRREWLEHPPELSRKRAQRKNTHSM HHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNSGSSESILRSRLPSVYMVVPKPPKIYGLIPRYESGKLLRWSVSITRRGKHFDKEFRVA CCCCCHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEE TYGDPEKAKAAAIAYRDELLKKVPAMSRREFGTIVRSNNTSGIPGVSRREENGYARWSAL ECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEE VSLPDGTTRRRTFAVVKYGEEVARQKAIEARSELLKLLDGWFVHHPDAVPLGQTPSAVVP EECCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEE IVMPKRERSLAKGKRQPSPEKRVYRMEIKWSLRSGVQVCRDYWVAECAVPTGGTRRRQFS EEECCHHHHHHHCCCCCCHHHEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEE VAEYGEDGARRLAFEQRREWLEHPPELSRKRAQRKNTHSM HHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA