| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is finQ [H]
Identifier: 120611378
GI number: 120611378
Start: 2981864
End: 2982391
Strand: Direct
Name: finQ [H]
Synonym: Aave_2714
Alternate gene names: 120611378
Gene position: 2981864-2982391 (Clockwise)
Preceding gene: 120611377
Following gene: 120611379
Centisome position: 55.71
GC content: 66.29
Gene sequence:
>528_bases GTGGGCACGCTCCAGCACTCGATCGAAGAGGCGGTAACCACCTCTGCTCTGCGACTTGGGCACCATGGCCAGGCGCTGCC CGACTTCCGGCGATCGTCCTCAGAGATCGTGGCGTCGCTCGGGACCGTCCTCTCGCTGGTGCTCTACATCTGCAGCGCTG GCGCTGACATCACCCAGCGGGGGAAGGCGTTGCAGCCTGCCAACCCCGAGCCACAGCAGACTCGGCGCCAAGGCACGAAG CTGTTTGCCGCGGCAGGGCCGCGTGAATGGGACGTAGGTGTGCGGCTTGGTGCCGCGCTGCGCGCAGCCTACCAAGACGC ACAGGGTGATGGGCAACCCCACCAGGGCCCGCGTGGGCTTGTGCGCCGAGCCCACTGGCATGGCTTCCGTACAGGCCCCT CGAAGCGCGAAGACGGCTCGGCCATTGAAGCAGCGGCTCGGTCGTTGGATGTTCGCTGGATGCCGCCGATCCCTGTAAAT CTGCCGGACATCGATGCTCTTCCTTCCACCGTGAAGCCAGTGCGGTGA
Upstream 100 bases:
>100_bases CCGCTTCCACCTGGAGACACCCCCCAGCGACTTCGTTCCGTGGCACCTCGATCTGATGGTCCCGCACCGCATGGACCCAT AATGGATCCACTGCAGCCTG
Downstream 100 bases:
>100_bases GCGATGCGCGAGCAGGCCAGTCGCACATGGATCATGGCGCCCGCCGGCCCGGTTCCGCCTCGACAATCACTGTATGCGTG TTTCTGACCTCTCCGGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGTLQHSIEEAVTTSALRLGHHGQALPDFRRSSSEIVASLGTVLSLVLYICSAGADITQRGKALQPANPEPQQTRRQGTK LFAAAGPREWDVGVRLGAALRAAYQDAQGDGQPHQGPRGLVRRAHWHGFRTGPSKREDGSAIEAAARSLDVRWMPPIPVN LPDIDALPSTVKPVR
Sequences:
>Translated_175_residues MGTLQHSIEEAVTTSALRLGHHGQALPDFRRSSSEIVASLGTVLSLVLYICSAGADITQRGKALQPANPEPQQTRRQGTK LFAAAGPREWDVGVRLGAALRAAYQDAQGDGQPHQGPRGLVRRAHWHGFRTGPSKREDGSAIEAAARSLDVRWMPPIPVN LPDIDALPSTVKPVR >Mature_174_residues GTLQHSIEEAVTTSALRLGHHGQALPDFRRSSSEIVASLGTVLSLVLYICSAGADITQRGKALQPANPEPQQTRRQGTKL FAAAGPREWDVGVRLGAALRAAYQDAQGDGQPHQGPRGLVRRAHWHGFRTGPSKREDGSAIEAAARSLDVRWMPPIPVNL PDIDALPSTVKPVR
Specific function: Transcriptional inhibitor of the F plasmid transfer genes. FinQ may regulate a gene or genes encoded on the IncI plasmids, and coincidentally may inhibit F transfer when coresident [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18820; Mature: 18688
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLQHSIEEAVTTSALRLGHHGQALPDFRRSSSEIVASLGTVLSLVLYICSAGADITQR CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC GKALQPANPEPQQTRRQGTKLFAAAGPREWDVGVRLGAALRAAYQDAQGDGQPHQGPRGL CCCCCCCCCCHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH VRRAHWHGFRTGPSKREDGSAIEAAARSLDVRWMPPIPVNLPDIDALPSTVKPVR HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTLQHSIEEAVTTSALRLGHHGQALPDFRRSSSEIVASLGTVLSLVLYICSAGADITQR CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC GKALQPANPEPQQTRRQGTKLFAAAGPREWDVGVRLGAALRAAYQDAQGDGQPHQGPRGL CCCCCCCCCCHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH VRRAHWHGFRTGPSKREDGSAIEAAARSLDVRWMPPIPVNLPDIDALPSTVKPVR HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2543909 [H]