| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610836
Identifier: 120610836
GI number: 120610836
Start: 2376123
End: 2377142
Strand: Reverse
Name: 120610836
Synonym: Aave_2162
Alternate gene names: NA
Gene position: 2377142-2376123 (Counterclockwise)
Preceding gene: 120610837
Following gene: 120610835
Centisome position: 44.41
GC content: 72.75
Gene sequence:
>1020_bases ATGACATCCGCTGCGGGCGATGCCCTACCGCGTACGGTATCGCCGCGGAACCCTGTCACCGCGCTCCGCGGGCGGCTGCA GCGCTGGTGGCAGGCGCGGCTGCCGCGCACGGACACCACGCTGCTCACGCAGCGCAATGTGTACATCCTGCCCACGGGCG CTGGGTGGATGCTGGCGCTCACGCTGCTGGTGCTGCTGGTGGCGTCGATCAATTTCCAGCTCAACCTGGGCTACCTGCTC ACCTTCCTGCTGGCCGGCAGCGCGGTGGCGGGCATGCACGTGTGCCATGCCACGCTGCGCGGGCTGACGCTGCACCTGCT GCCGCCGGAGCCGTGCTTCCTGGGGCAGAGCGCGGTGTTCGAGATCCAGCTGTCGAGCACGCGCAAGTCGCCGCGCCACG GCATCGCGCTGGCGGTGCATGGCGGCGGTGCGCCGCACTGGGCCTGGGCGGACGTGCCAGCGCAGGGCACGGCTACCGTG CAGGTGGCCTTCCAGCCGCAGCGCAGGGGCCTGCACGACGTGCCGCTGCTCACGGCCGAGACGCGTTTCCCGCTGGGCAC GTTCCGGGTGTGGACGCTTTGGCGACCGGCCGCGCAGGTGCTGGTCTATCCGCGTCCCGAGCTGCCGCCGCCGCCCCTTC CGGCTGGCGAGCCGAGCGCAGGCGGCGCCGGCAGCGCGCCGGCGCAGGGCATCGGCGAGTTCGACGGCGTGCGCGCCTAC CGGCGCGGGGATCCGCTCAAGCTCGTGGTCTGGAAGAAGGCCGCGCGGTCGATCGCCACCGGCACGGACGACCTCGTGAG CCGCGACGCGCAGCAGACGCGGCGGCAGGAACTGTGGCTCGACATGGCGCTCACCAGCCTCAGCGATCCCGAGGCCCGCA TCTCCCGCCTCGCGTCCTGGGTGCTGCAGGCCGAGCGGCTGGGCCTGGATTACGGCCTGCGCCTGCCTTCCGGTGAAATC GTCCAGGGCAGCGGACCGGCGCACGAGCGGCGCTGCCTGGAGGCGCTCGCACTGTGCTGA
Upstream 100 bases:
>100_bases CCGCGGCCACTCGACGGGTGAAGGCCGCGCGGCTTTCAAGCGGCGCGCACGTAGCGTGCCAAGCGTGCCATGGGCATAGC GCATCGCCGGAGGTACAGGC
Downstream 100 bases:
>100_bases ACCCGACCCATCTTCCCGCGCCGGACCGCACCCCGGAGGGCGCCATCCCATGACCGCGCTGCGCAAGACGTTCTCGAACC TGCCGCGCGAGACGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTSAAGDALPRTVSPRNPVTALRGRLQRWWQARLPRTDTTLLTQRNVYILPTGAGWMLALTLLVLLVASINFQLNLGYLL TFLLAGSAVAGMHVCHATLRGLTLHLLPPEPCFLGQSAVFEIQLSSTRKSPRHGIALAVHGGGAPHWAWADVPAQGTATV QVAFQPQRRGLHDVPLLTAETRFPLGTFRVWTLWRPAAQVLVYPRPELPPPPLPAGEPSAGGAGSAPAQGIGEFDGVRAY RRGDPLKLVVWKKAARSIATGTDDLVSRDAQQTRRQELWLDMALTSLSDPEARISRLASWVLQAERLGLDYGLRLPSGEI VQGSGPAHERRCLEALALC
Sequences:
>Translated_339_residues MTSAAGDALPRTVSPRNPVTALRGRLQRWWQARLPRTDTTLLTQRNVYILPTGAGWMLALTLLVLLVASINFQLNLGYLL TFLLAGSAVAGMHVCHATLRGLTLHLLPPEPCFLGQSAVFEIQLSSTRKSPRHGIALAVHGGGAPHWAWADVPAQGTATV QVAFQPQRRGLHDVPLLTAETRFPLGTFRVWTLWRPAAQVLVYPRPELPPPPLPAGEPSAGGAGSAPAQGIGEFDGVRAY RRGDPLKLVVWKKAARSIATGTDDLVSRDAQQTRRQELWLDMALTSLSDPEARISRLASWVLQAERLGLDYGLRLPSGEI VQGSGPAHERRCLEALALC >Mature_338_residues TSAAGDALPRTVSPRNPVTALRGRLQRWWQARLPRTDTTLLTQRNVYILPTGAGWMLALTLLVLLVASINFQLNLGYLLT FLLAGSAVAGMHVCHATLRGLTLHLLPPEPCFLGQSAVFEIQLSSTRKSPRHGIALAVHGGGAPHWAWADVPAQGTATVQ VAFQPQRRGLHDVPLLTAETRFPLGTFRVWTLWRPAAQVLVYPRPELPPPPLPAGEPSAGGAGSAPAQGIGEFDGVRAYR RGDPLKLVVWKKAARSIATGTDDLVSRDAQQTRRQELWLDMALTSLSDPEARISRLASWVLQAERLGLDYGLRLPSGEIV QGSGPAHERRCLEALALC
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36767; Mature: 36636
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAAGDALPRTVSPRNPVTALRGRLQRWWQARLPRTDTTLLTQRNVYILPTGAGWMLAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCHHHHHH TLLVLLVASINFQLNLGYLLTFLLAGSAVAGMHVCHATLRGLTLHLLPPEPCFLGQSAVF HHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEE EIQLSSTRKSPRHGIALAVHGGGAPHWAWADVPAQGTATVQVAFQPQRRGLHDVPLLTAE EEEECCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEEEEECHHHCCCCCCCEEEEC TRFPLGTFRVWTLWRPAAQVLVYPRPELPPPPLPAGEPSAGGAGSAPAQGIGEFDGVRAY CCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RRGDPLKLVVWKKAARSIATGTDDLVSRDAQQTRRQELWLDMALTSLSDPEARISRLASW HCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLQAERLGLDYGLRLPSGEIVQGSGPAHERRCLEALALC HHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure TSAAGDALPRTVSPRNPVTALRGRLQRWWQARLPRTDTTLLTQRNVYILPTGAGWMLAL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCHHHHHH TLLVLLVASINFQLNLGYLLTFLLAGSAVAGMHVCHATLRGLTLHLLPPEPCFLGQSAVF HHHHHHHHHCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEE EIQLSSTRKSPRHGIALAVHGGGAPHWAWADVPAQGTATVQVAFQPQRRGLHDVPLLTAE EEEECCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEEEEECHHHCCCCCCCEEEEC TRFPLGTFRVWTLWRPAAQVLVYPRPELPPPPLPAGEPSAGGAGSAPAQGIGEFDGVRAY CCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RRGDPLKLVVWKKAARSIATGTDDLVSRDAQQTRRQELWLDMALTSLSDPEARISRLASW HCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLQAERLGLDYGLRLPSGEIVQGSGPAHERRCLEALALC HHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA