| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610818
Identifier: 120610818
GI number: 120610818
Start: 2354861
End: 2355349
Strand: Reverse
Name: 120610818
Synonym: Aave_2143
Alternate gene names: NA
Gene position: 2355349-2354861 (Counterclockwise)
Preceding gene: 120610819
Following gene: 120610817
Centisome position: 44.0
GC content: 64.21
Gene sequence:
>489_bases TTGACGCTTCGTACCCTGGCCGCACGGCTGGGCGTCACGCCGATGAGCCTCTACCACCACGTTGGCGATCATGCCGGGTT GCTGCGCGCGCTGTCGGACCGGGTGTACGCGGAAGTCATGGAAGCAGTGGGGGAGTCGCCGGACCGTCGGGCAGAAATCC AGGCGCTGCTCTTTCGCTATTACCTTGCCGTGGGCCGCCATCCGCAGCTCACGCTGGCGATCTTCACGACACCAGAGGCC TTTGCGGGGGTGACCCGCCAAATCACCGACCGCCTGACAAACTTGCTTGCAGCGGTCACGGCCGAGCCCATCCTGTGGCG TGACATTCTGGTTGACCATGCGCATGGCAGCGGCCTGGCCCTTGCCTCGGCCAGACATGGGCAGACCCAGACGCTGCAGG AGCAATATCGACTGGCCCTCGATCGTTTGCTGGATCACTTGGTGGAAAAGGGACGCGTCGACACATCTGCGCGTGCCGCC GTTGCCTAG
Upstream 100 bases:
>100_bases GACCCGCCCACGTGGGCGCCCGACGCGCGGGAAGGGAGTGACGCGGGACGATATTCTCGCCACTGCGCTGACGCTGCTGG ATGAAAGCGGAGGGCACGGC
Downstream 100 bases:
>100_bases AGCGTGAATAGAGCTTCCGGGTTTTCAAAACCAACAGGAATATTGACCACCCACAAAATTCCTGAGTGGTATGATGGACG TTGTTCTGGTCTGGCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTLRTLAARLGVTPMSLYHHVGDHAGLLRALSDRVYAEVMEAVGESPDRRAEIQALLFRYYLAVGRHPQLTLAIFTTPEA FAGVTRQITDRLTNLLAAVTAEPILWRDILVDHAHGSGLALASARHGQTQTLQEQYRLALDRLLDHLVEKGRVDTSARAA VA
Sequences:
>Translated_162_residues MTLRTLAARLGVTPMSLYHHVGDHAGLLRALSDRVYAEVMEAVGESPDRRAEIQALLFRYYLAVGRHPQLTLAIFTTPEA FAGVTRQITDRLTNLLAAVTAEPILWRDILVDHAHGSGLALASARHGQTQTLQEQYRLALDRLLDHLVEKGRVDTSARAA VA >Mature_161_residues TLRTLAARLGVTPMSLYHHVGDHAGLLRALSDRVYAEVMEAVGESPDRRAEIQALLFRYYLAVGRHPQLTLAIFTTPEAF AGVTRQITDRLTNLLAAVTAEPILWRDILVDHAHGSGLALASARHGQTQTLQEQYRLALDRLLDHLVEKGRVDTSARAAV A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17843; Mature: 17712
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRTLAARLGVTPMSLYHHVGDHAGLLRALSDRVYAEVMEAVGESPDRRAEIQALLFRY CCHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLAVGRHPQLTLAIFTTPEAFAGVTRQITDRLTNLLAAVTAEPILWRDILVDHAHGSGLA HHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE LASARHGQTQTLQEQYRLALDRLLDHLVEKGRVDTSARAAVA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure TLRTLAARLGVTPMSLYHHVGDHAGLLRALSDRVYAEVMEAVGESPDRRAEIQALLFRY CHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLAVGRHPQLTLAIFTTPEAFAGVTRQITDRLTNLLAAVTAEPILWRDILVDHAHGSGLA HHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEE LASARHGQTQTLQEQYRLALDRLLDHLVEKGRVDTSARAAVA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA