| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610735
Identifier: 120610735
GI number: 120610735
Start: 2252478
End: 2253953
Strand: Reverse
Name: 120610735
Synonym: Aave_2057
Alternate gene names: NA
Gene position: 2253953-2252478 (Counterclockwise)
Preceding gene: 120610736
Following gene: 120610734
Centisome position: 42.11
GC content: 68.02
Gene sequence:
>1476_bases ATGCGGATCCATCCACTCCTTCTTGCGCTGGCCCTCGTGTCCAACGCGTCCGCGGAGGTGCCGCGCATGCCCGCCGCGGT GCAGATTCCCTCTTCCGGGAAGCCGGCCCTGTCGTCGGCGCAGCGGCAGGGAACGGAGTACAGCGACCTCGCCAGGCACG GCTACGTCGAAGAGGAGTATTACCTCCAGGGCATCGCGCCGGCCATCACGGCAGCCGGGGAAACCCTTTTCCAGGCGCCC TACACCACGCGCATCCTCGTGCGCAAGCCGGCCGATCCGGCACGCTTCAACGGCACCGTGGTCATCGAGCCGTTCAGCTG GTTCGGCGAGCGCGGCGCTGGATGGATCCTCACGCGCGACTACCTGCTGCGCCGGGGGTATGCCTACGTCGGCTATACGC TGAACATCAACCAGCCCGCTGCCGATCCCAAGTTCATCTCGGAGACACCCGCCGCCGAAGCCGAGGCCATCGCGAGGTAC GGAAAGATCGTGAACTTCGAATTCATGCGCCGCATGGACTATGCCCGCTACGCGCCGCTGGGCACCTACTACGACCCGGT GCGCTTCACCCGCGGCGGCGCGCCCGACCCGTTCGTTCCGCAATCTCAGGGCATCGCCGCCCAGCTCGCCCTCCTGCTGA AGACCCGGGCTCCGCGGGGCCCGGTGGGTGGCCTGAACGTGCGCCGCATCTACGTCAACAGCTGGGCCGTGACGGCGCAG GTCTGGATGGACTACCTCGACCAGGGCCGGCACCAGCAATGGCGCATGCCCGACGGGCGTCCGCTCATCGATGCATACAT GACCGGCCGCATGGCCTACGGCGAGGTGGGCGGCGATGCCGTCCGGGTGCCGCGGAAGATGCCCGACCGCGCGCCTTTCG TGACCATCTACAGCCAGTCCGAGCTCATGCACGACGCGATCGAGCAGATCCCGCTGCCGCAGGACACGGACCGCCCGCGG CTTCGCTACTACGAGGTGACCGGCATGCCCCACCTGCGCCTGGCCGACCTGGGCACCGAACATACCGAATTGCTTCCGGC GGACGTCGGCAAAGGCGACGATCCGCGTTGCCGCACGCTGTACGACGAACCGGTGGAACTGATCGCCTCGGCCCTCCTGG ACGGAATGGATCGCTGGGTCCGCGAGGACAGGCCCATGCCCAGGGCACCACGGGTGGCGCGCGAAGGCAAGGCCGCGGCC CGCGATGCCGGGACCGGCAACATGCAGGGAGGCGTGCGGCCGCCCTGGATCCGGGTGCCGAGCGCCGCCTACCTGACCGA ACAGGAAACGGGCTGCGGCCTGGTCTACGACACCAAGCTTCCGTATCCGCAGGCAGAGCTGCGCAGGCGCTATGGGAACT TCGGCAACTATGAACGGCAGTTCAACGAAGCCAGGCATCTGTCGGTCAGGGAAGGGTATCTGCTTCCGGAGGACGCGGCG CGCCTGCGGCCGGTCGCGACGCCCGGTGATTTCTAG
Upstream 100 bases:
>100_bases TACAAGCGGTCGGACTACCAGATCCAGGAGTACGTCTGCGAGAACAACCAGATCGTGATCGACAAGGAGGGCAAGGCGTC CCTCAGCCGCGATTGAAGCC
Downstream 100 bases:
>100_bases CCACGCTTTGCGGAGGACCATCCGATGTCATCAGCACACTTCATCGCCTGGCTCTACGAGTCCGCGTTGAGCACGACGAT CAGGGACGTCCTCTGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MRIHPLLLALALVSNASAEVPRMPAAVQIPSSGKPALSSAQRQGTEYSDLARHGYVEEEYYLQGIAPAITAAGETLFQAP YTTRILVRKPADPARFNGTVVIEPFSWFGERGAGWILTRDYLLRRGYAYVGYTLNINQPAADPKFISETPAAEAEAIARY GKIVNFEFMRRMDYARYAPLGTYYDPVRFTRGGAPDPFVPQSQGIAAQLALLLKTRAPRGPVGGLNVRRIYVNSWAVTAQ VWMDYLDQGRHQQWRMPDGRPLIDAYMTGRMAYGEVGGDAVRVPRKMPDRAPFVTIYSQSELMHDAIEQIPLPQDTDRPR LRYYEVTGMPHLRLADLGTEHTELLPADVGKGDDPRCRTLYDEPVELIASALLDGMDRWVREDRPMPRAPRVAREGKAAA RDAGTGNMQGGVRPPWIRVPSAAYLTEQETGCGLVYDTKLPYPQAELRRRYGNFGNYERQFNEARHLSVREGYLLPEDAA RLRPVATPGDF
Sequences:
>Translated_491_residues MRIHPLLLALALVSNASAEVPRMPAAVQIPSSGKPALSSAQRQGTEYSDLARHGYVEEEYYLQGIAPAITAAGETLFQAP YTTRILVRKPADPARFNGTVVIEPFSWFGERGAGWILTRDYLLRRGYAYVGYTLNINQPAADPKFISETPAAEAEAIARY GKIVNFEFMRRMDYARYAPLGTYYDPVRFTRGGAPDPFVPQSQGIAAQLALLLKTRAPRGPVGGLNVRRIYVNSWAVTAQ VWMDYLDQGRHQQWRMPDGRPLIDAYMTGRMAYGEVGGDAVRVPRKMPDRAPFVTIYSQSELMHDAIEQIPLPQDTDRPR LRYYEVTGMPHLRLADLGTEHTELLPADVGKGDDPRCRTLYDEPVELIASALLDGMDRWVREDRPMPRAPRVAREGKAAA RDAGTGNMQGGVRPPWIRVPSAAYLTEQETGCGLVYDTKLPYPQAELRRRYGNFGNYERQFNEARHLSVREGYLLPEDAA RLRPVATPGDF >Mature_491_residues MRIHPLLLALALVSNASAEVPRMPAAVQIPSSGKPALSSAQRQGTEYSDLARHGYVEEEYYLQGIAPAITAAGETLFQAP YTTRILVRKPADPARFNGTVVIEPFSWFGERGAGWILTRDYLLRRGYAYVGYTLNINQPAADPKFISETPAAEAEAIARY GKIVNFEFMRRMDYARYAPLGTYYDPVRFTRGGAPDPFVPQSQGIAAQLALLLKTRAPRGPVGGLNVRRIYVNSWAVTAQ VWMDYLDQGRHQQWRMPDGRPLIDAYMTGRMAYGEVGGDAVRVPRKMPDRAPFVTIYSQSELMHDAIEQIPLPQDTDRPR LRYYEVTGMPHLRLADLGTEHTELLPADVGKGDDPRCRTLYDEPVELIASALLDGMDRWVREDRPMPRAPRVAREGKAAA RDAGTGNMQGGVRPPWIRVPSAAYLTEQETGCGLVYDTKLPYPQAELRRRYGNFGNYERQFNEARHLSVREGYLLPEDAA RLRPVATPGDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55004; Mature: 55004
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHPLLLALALVSNASAEVPRMPAAVQIPSSGKPALSSAQRQGTEYSDLARHGYVEEEY CCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHH YLQGIAPAITAAGETLFQAPYTTRILVRKPADPARFNGTVVIEPFSWFGERGAGWILTRD HHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCEEEECCHHHHCCCCCCEEEEHH YLLRRGYAYVGYTLNINQPAADPKFISETPAAEAEAIARYGKIVNFEFMRRMDYARYAPL HHHHCCCEEEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC GTYYDPVRFTRGGAPDPFVPQSQGIAAQLALLLKTRAPRGPVGGLNVRRIYVNSWAVTAQ CCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHHHH VWMDYLDQGRHQQWRMPDGRPLIDAYMTGRMAYGEVGGDAVRVPRKMPDRAPFVTIYSQS HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEECCCCCCEEECCCCCCCCCCEEEEECHH ELMHDAIEQIPLPQDTDRPRLRYYEVTGMPHLRLADLGTEHTELLPADVGKGDDPRCRTL HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHCCCCHHHCCCCCCCCCCCCCHHHH YDEPVELIASALLDGMDRWVREDRPMPRAPRVAREGKAAARDAGTGNMQGGVRPPWIRVP HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEECC SAAYLTEQETGCGLVYDTKLPYPQAELRRRYGNFGNYERQFNEARHLSVREGYLLPEDAA CHHEEECCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCHHH RLRPVATPGDF HCCCCCCCCCC >Mature Secondary Structure MRIHPLLLALALVSNASAEVPRMPAAVQIPSSGKPALSSAQRQGTEYSDLARHGYVEEEY CCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHH YLQGIAPAITAAGETLFQAPYTTRILVRKPADPARFNGTVVIEPFSWFGERGAGWILTRD HHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCEEEECCHHHHCCCCCCEEEEHH YLLRRGYAYVGYTLNINQPAADPKFISETPAAEAEAIARYGKIVNFEFMRRMDYARYAPL HHHHCCCEEEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC GTYYDPVRFTRGGAPDPFVPQSQGIAAQLALLLKTRAPRGPVGGLNVRRIYVNSWAVTAQ CCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHHHH VWMDYLDQGRHQQWRMPDGRPLIDAYMTGRMAYGEVGGDAVRVPRKMPDRAPFVTIYSQS HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEECCCCCCEEECCCCCCCCCCEEEEECHH ELMHDAIEQIPLPQDTDRPRLRYYEVTGMPHLRLADLGTEHTELLPADVGKGDDPRCRTL HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHCCCCHHHCCCCCCCCCCCCCHHHH YDEPVELIASALLDGMDRWVREDRPMPRAPRVAREGKAAARDAGTGNMQGGVRPPWIRVP HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEECC SAAYLTEQETGCGLVYDTKLPYPQAELRRRYGNFGNYERQFNEARHLSVREGYLLPEDAA CHHEEECCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCHHH RLRPVATPGDF HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA