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The map label for this gene is yiaN [C]

Identifier: 120610698

GI number: 120610698

Start: 2194910

End: 2196496

Strand: Reverse

Name: yiaN [C]

Synonym: Aave_2018

Alternate gene names: 120610698

Gene position: 2196496-2194910 (Counterclockwise)

Preceding gene: 120610699

Following gene: 120610697

Centisome position: 41.03

GC content: 65.53

Gene sequence:

>1587_bases
ATGCACATGGAAAACTTCGCCCCGATCATGTTCGCGGGGCTGATCGTGATCATGCTGATCGGCTTTCCGGTCGCGTTCTC
GCTCGCGGCCCTGGGCCTGTTCAGCGGCTTCTTCGCCATCGAGATGGGCTGGTTCCCGGCCAACTTCATGGCCAACCTGC
CGATCAACATGTTCGGCATCCTGTCGAACGACCTGCTCCTGGCCATCCCGTTCTTCACGCTGATGGGCGCGGTGCTCGAG
AAATGCGGCCTCGCCGAGGACATGCTCGACTCCATGGGCCAGCTCTTCGGCCCCGTGCGCGGCGGCCTGGGCTACTCGGT
CATCATCGTGGGCTTCATCCTGGGCGCCATCACCGGCACCGTGGCCGGCCAGGTGATCGCCATGGCGATGATCTCGCTGC
CCGTGATGATGCGCTACAACTACAACATGCGCTACGCCACCGGCGTGCTGGCCGCCTCGGGCACCATCACCCAGCTCGTG
CCGCCCTCGCTGGTGCTGATCGTCATGGCCGACCAGCTCGGCCGCTCGGTGGGCGACATGTACAAGGGCGCGTGGGGTCC
CGCCATCCTGCAGGTGCTGATCTTCGCGATCTACACCTTCCTGCTGGGCCGCATCCGCCCCGAATACGTGCCCGGCCTGC
CCAAATCGGCGCGCACGCTGCACGGCTGGGCCCTCTGGGGCAAATGCCTGCGTGGCATCATCCCCTCGGCCATCCTGATC
TTCGCGGTGCTCGGCTCCATGGGCGGCCTGCCGTTCATGGACCACGCCATCGCCACGCCCACCGAGGCGGGCGCCATGGG
CGCCGTGGGCTCGCTGATCCTCGCGGCCATCCACAAGCGGCTGACGTGGAAGCTCATCAAGGAAGCCATGGACGGCACCA
TGCGCCTCACCGCCATGGTGGTGTTCATCCTGATCGGCTCGCGCGTGTTCTCGCTGGTCTTCCAGGGCGTCGACGGGGCG
ATCTGGATCGAGCACATGCTCAGCGACCTGCCGGGCGGCCAGATCGGCTTCCTGATCGTGGTGAACCTCTTCATCTTCTT
CCTGGCGTTCTTCCTCGACTTTTTCGAGATCGCCTTCATCATCCTGCCGCTGCTGGGCCCCGTGGCCCACAAGCTGGGCA
TCGACCTCGTGTGGTTCGGCGTGCTGCTGTGCGTGAACATGCAGACCAGCTTCATGCACCCGCCCTTCGGCTTCGCCCTC
TTCTACCTGCGCGGCATCGCCGACACGCTGTTCAAGGAAAAGCGCATCGACCGGCCGGTGAAATCGAGCGACATCTACAT
GGGCTCCATCCCGTGGGTGGTGATGCAGCTGATCCTCGTGGCGATCGTGATCTTCTTCCCGCAGACCGTGACCATCTTCC
TCGACAAGGAAAAGGTGGTCGATCTGGACAAGGTGCAGCTCGACATGCCCGCGGACAGCTCGGCGGAACCGACCATCAAC
ATGGACGACCCCTTCGGCACCGGCAAACCCGCGGACGGCGCCTCGGACGCCCCGGGCGCGGAGCCCGCGATGCCGATGCC
GGAACCGATGCCGGAACCGATGCCCGAGCCGGCGGCGCCGGAAGGCGCGGCCAGCACGCCGCGATGA

Upstream 100 bases:

>100_bases
CGGGGCACCTGCAGATCAGCACCCATTACGAGAAGCCGGTGCAGTAAACGCATCGACAAAAAGCGCCGACCGACCCGACT
TCTCCAGGAAGACTCTCCCC

Downstream 100 bases:

>100_bases
CGCAGCACCATGGGCAGCAGCCCACGCCCGGCAACGGCAGGGCCGCCATCGACATCGAAAGCGCCGCCTTCCCGCCCCTG
GTGCGGCTGCTCGCCGTGGC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MHMENFAPIMFAGLIVIMLIGFPVAFSLAALGLFSGFFAIEMGWFPANFMANLPINMFGILSNDLLLAIPFFTLMGAVLE
KCGLAEDMLDSMGQLFGPVRGGLGYSVIIVGFILGAITGTVAGQVIAMAMISLPVMMRYNYNMRYATGVLAASGTITQLV
PPSLVLIVMADQLGRSVGDMYKGAWGPAILQVLIFAIYTFLLGRIRPEYVPGLPKSARTLHGWALWGKCLRGIIPSAILI
FAVLGSMGGLPFMDHAIATPTEAGAMGAVGSLILAAIHKRLTWKLIKEAMDGTMRLTAMVVFILIGSRVFSLVFQGVDGA
IWIEHMLSDLPGGQIGFLIVVNLFIFFLAFFLDFFEIAFIILPLLGPVAHKLGIDLVWFGVLLCVNMQTSFMHPPFGFAL
FYLRGIADTLFKEKRIDRPVKSSDIYMGSIPWVVMQLILVAIVIFFPQTVTIFLDKEKVVDLDKVQLDMPADSSAEPTIN
MDDPFGTGKPADGASDAPGAEPAMPMPEPMPEPMPEPAAPEGAASTPR

Sequences:

>Translated_528_residues
MHMENFAPIMFAGLIVIMLIGFPVAFSLAALGLFSGFFAIEMGWFPANFMANLPINMFGILSNDLLLAIPFFTLMGAVLE
KCGLAEDMLDSMGQLFGPVRGGLGYSVIIVGFILGAITGTVAGQVIAMAMISLPVMMRYNYNMRYATGVLAASGTITQLV
PPSLVLIVMADQLGRSVGDMYKGAWGPAILQVLIFAIYTFLLGRIRPEYVPGLPKSARTLHGWALWGKCLRGIIPSAILI
FAVLGSMGGLPFMDHAIATPTEAGAMGAVGSLILAAIHKRLTWKLIKEAMDGTMRLTAMVVFILIGSRVFSLVFQGVDGA
IWIEHMLSDLPGGQIGFLIVVNLFIFFLAFFLDFFEIAFIILPLLGPVAHKLGIDLVWFGVLLCVNMQTSFMHPPFGFAL
FYLRGIADTLFKEKRIDRPVKSSDIYMGSIPWVVMQLILVAIVIFFPQTVTIFLDKEKVVDLDKVQLDMPADSSAEPTIN
MDDPFGTGKPADGASDAPGAEPAMPMPEPMPEPMPEPAAPEGAASTPR
>Mature_528_residues
MHMENFAPIMFAGLIVIMLIGFPVAFSLAALGLFSGFFAIEMGWFPANFMANLPINMFGILSNDLLLAIPFFTLMGAVLE
KCGLAEDMLDSMGQLFGPVRGGLGYSVIIVGFILGAITGTVAGQVIAMAMISLPVMMRYNYNMRYATGVLAASGTITQLV
PPSLVLIVMADQLGRSVGDMYKGAWGPAILQVLIFAIYTFLLGRIRPEYVPGLPKSARTLHGWALWGKCLRGIIPSAILI
FAVLGSMGGLPFMDHAIATPTEAGAMGAVGSLILAAIHKRLTWKLIKEAMDGTMRLTAMVVFILIGSRVFSLVFQGVDGA
IWIEHMLSDLPGGQIGFLIVVNLFIFFLAFFLDFFEIAFIILPLLGPVAHKLGIDLVWFGVLLCVNMQTSFMHPPFGFAL
FYLRGIADTLFKEKRIDRPVKSSDIYMGSIPWVVMQLILVAIVIFFPQTVTIFLDKEKVVDLDKVQLDMPADSSAEPTIN
MDDPFGTGKPADGASDAPGAEPAMPMPEPMPEPMPEPAAPEGAASTPR

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=395, Percent_Identity=26.0759493670886, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 57100; Mature: 57100

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]