| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610697
Identifier: 120610697
GI number: 120610697
Start: 2194386
End: 2194913
Strand: Reverse
Name: 120610697
Synonym: Aave_2017
Alternate gene names: NA
Gene position: 2194913-2194386 (Counterclockwise)
Preceding gene: 120610698
Following gene: 120610692
Centisome position: 41.01
GC content: 70.08
Gene sequence:
>528_bases ATGACGCAGCACCATGGGCAGCAGCCCACGCCCGGCAACGGCAGGGCCGCCATCGACATCGAAAGCGCCGCCTTCCCGCC CCTGGTGCGGCTGCTCGCCGTGGCCATCGTGGGCGGGCTGGCGGCCTTCGCGCTCTGGTCCATCCCCGCGCTGCGCAACG CGCAATGGACCTTTCCCGCCCTGGCGACCTTCGGCATCGCGGCCGTGCTGATCGGCTGGATGGGCTGGTGGATGGTCTTC AGCCGCACGCGCTTCCGTTCGACCGAAGACGGTGGCGTGATCGTGCAGACATGGCTCTGGGACAAGCGGGTGCGCGCGGC CGACGTGGCCAGCTTCAAGATCGTGCACTGGCCGTGGTTCCAGGCCGTCATCGCGCCGCGCATCCTGCTGCGGCGCAAGG GCGGGGGGATCACGTGGGTGCATGCGGCGGATGCGGGGTTGCTGGTGGCGTTCGGGGAGAGTGTGGTGAGGGTGGGGGCT GTGCCTTCGGCCCTGTCCTCTTCTCCGCCTGAGGCACAGGCTCGCTGA
Upstream 100 bases:
>100_bases CGGACGCCCCGGGCGCGGAGCCCGCGATGCCGATGCCGGAACCGATGCCGGAACCGATGCCCGAGCCGGCGGCGCCGGAA GGCGCGGCCAGCACGCCGCG
Downstream 100 bases:
>100_bases GGGTTTGTTTCCCGGAGCCGGGATTTCGCCCCGGCGGGCGAGTCACTTTCTTTCGCTTCGCCGAAAGAAAGTAACCAAAG AAAGGGCGACCCTGCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTQHHGQQPTPGNGRAAIDIESAAFPPLVRLLAVAIVGGLAAFALWSIPALRNAQWTFPALATFGIAAVLIGWMGWWMVF SRTRFRSTEDGGVIVQTWLWDKRVRAADVASFKIVHWPWFQAVIAPRILLRRKGGGITWVHAADAGLLVAFGESVVRVGA VPSALSSSPPEAQAR
Sequences:
>Translated_175_residues MTQHHGQQPTPGNGRAAIDIESAAFPPLVRLLAVAIVGGLAAFALWSIPALRNAQWTFPALATFGIAAVLIGWMGWWMVF SRTRFRSTEDGGVIVQTWLWDKRVRAADVASFKIVHWPWFQAVIAPRILLRRKGGGITWVHAADAGLLVAFGESVVRVGA VPSALSSSPPEAQAR >Mature_174_residues TQHHGQQPTPGNGRAAIDIESAAFPPLVRLLAVAIVGGLAAFALWSIPALRNAQWTFPALATFGIAAVLIGWMGWWMVFS RTRFRSTEDGGVIVQTWLWDKRVRAADVASFKIVHWPWFQAVIAPRILLRRKGGGITWVHAADAGLLVAFGESVVRVGAV PSALSSSPPEAQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18944; Mature: 18813
Theoretical pI: Translated: 12.01; Mature: 12.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHHGQQPTPGNGRAAIDIESAAFPPLVRLLAVAIVGGLAAFALWSIPALRNAQWTFPA CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LATFGIAAVLIGWMGWWMVFSRTRFRSTEDGGVIVQTWLWDKRVRAADVASFKIVHWPWF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCEEEEEECHHH QAVIAPRILLRRKGGGITWVHAADAGLLVAFGESVVRVGAVPSALSSSPPEAQAR HHHHHHHHHEEECCCCEEEEEECCCCEEEECCHHHHHHCCCCHHHCCCCCCCCCC >Mature Secondary Structure TQHHGQQPTPGNGRAAIDIESAAFPPLVRLLAVAIVGGLAAFALWSIPALRNAQWTFPA CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LATFGIAAVLIGWMGWWMVFSRTRFRSTEDGGVIVQTWLWDKRVRAADVASFKIVHWPWF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCEEEEEECHHH QAVIAPRILLRRKGGGITWVHAADAGLLVAFGESVVRVGAVPSALSSSPPEAQAR HHHHHHHHHEEECCCCEEEEEECCCCEEEECCHHHHHHCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA