| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610691
Identifier: 120610691
GI number: 120610691
Start: 2186725
End: 2187642
Strand: Reverse
Name: 120610691
Synonym: Aave_2011
Alternate gene names: NA
Gene position: 2187642-2186725 (Counterclockwise)
Preceding gene: 120610692
Following gene: 120610690
Centisome position: 40.87
GC content: 71.02
Gene sequence:
>918_bases ATGCAAGCCCTCTGGATGGTCCTCGCCGCATTCCTCTTCGCGAGCATGGGGGTCTGCGTGAAGATGGCATCGGAACACTT CAACGCGGCCGAACTGGTGTGCTACCGGGGCATCATCGGCATGGCCATCCTCTGGGCGCTGGCGCGGCGCCAGGGCGTGG GACTGGGCACCCGCTACCCGGGCATGCACGCCTGGCGCAGCCTGATCGGCGTCGTCTCGCTCGGCGCATGGTTCTACGCC ATCGCGCACCTGCCGCTCGCCACGGCCATGACACTCAACTACATGAGCAGCGTGTGGATCGCGGCCTTCATCGTGGGCGG TGCCCTGCTGGCCTGGCGGCCGTCGGGCGGCACCGGCGGCACGCGCCCGCCCCTGCAGGCCCCGCTGGTGATGACCGTGA TGGCCGGGTTCGCGGGCGTGGTCATGATGCTGCGCCCCAGCCTGGACGCGCACCAGATGTTCGCGGGCCTCATCGGCCTG CTGTCGGGCCTGTCCGCCGCCTTCGCCTACATGCAGGTGATGGCGCTGTCGCGCATCGGCGAGCCGGAAACGCGCACGGT GTTCTATTTCGCGGTCGGCTCGGCCGTGGCGGGCGGCGCGGCCATGCTGCTCACGGGCGCCTCGGCCTGGCCGGGCTGGC CGGGCCTGTGGCTTCTGCCCATCGGCTTCCTGGCCGCCGCCGGCCAGCTCTGCATGACGCGCGCCTACGCGCGGGCGGGC TCGCAGCGCGGCACCCTGGTGGTCGCCAACCTGCAGTATTCCGGCATCGTGTTCGCGGGGGTGTACAGCGTGGTGCTGTT CGGCGACGACATTCCGCCCATCGGCTGGGCCGGCATGGCACTGATCATCGTGAGCGGGATCGTCGCCACGGTGCTGCGCG CGCGTGCGGCACCGGGAGCGCCGGCGGAAGAGCACTGA
Upstream 100 bases:
>100_bases GGTGGGCTTTTGCGTGCCATCTTTCCGGGCCGGGCCCTCGGGCCTGGCCTAACATCGGCGGGACGCCCCCCACCCGCCCC TCATCTTCCGCTCCACGCCC
Downstream 100 bases:
>100_bases GCCGGCGCGGGGCACGGGCGCGGCATGCCGACGTCGTGCCACGCGGTTGGCGGCCTGCGCCGACGCCGGGCAGGCCCCGC ACGCCGCACAATCCGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: DMT Family Permease; Integral Membrane Protein; Permease DMT Superfamily; Transporter Of DMT Superfamily; Drug/Metabolite Transporter Superfamily Permease
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MQALWMVLAAFLFASMGVCVKMASEHFNAAELVCYRGIIGMAILWALARRQGVGLGTRYPGMHAWRSLIGVVSLGAWFYA IAHLPLATAMTLNYMSSVWIAAFIVGGALLAWRPSGGTGGTRPPLQAPLVMTVMAGFAGVVMMLRPSLDAHQMFAGLIGL LSGLSAAFAYMQVMALSRIGEPETRTVFYFAVGSAVAGGAAMLLTGASAWPGWPGLWLLPIGFLAAAGQLCMTRAYARAG SQRGTLVVANLQYSGIVFAGVYSVVLFGDDIPPIGWAGMALIIVSGIVATVLRARAAPGAPAEEH
Sequences:
>Translated_305_residues MQALWMVLAAFLFASMGVCVKMASEHFNAAELVCYRGIIGMAILWALARRQGVGLGTRYPGMHAWRSLIGVVSLGAWFYA IAHLPLATAMTLNYMSSVWIAAFIVGGALLAWRPSGGTGGTRPPLQAPLVMTVMAGFAGVVMMLRPSLDAHQMFAGLIGL LSGLSAAFAYMQVMALSRIGEPETRTVFYFAVGSAVAGGAAMLLTGASAWPGWPGLWLLPIGFLAAAGQLCMTRAYARAG SQRGTLVVANLQYSGIVFAGVYSVVLFGDDIPPIGWAGMALIIVSGIVATVLRARAAPGAPAEEH >Mature_305_residues MQALWMVLAAFLFASMGVCVKMASEHFNAAELVCYRGIIGMAILWALARRQGVGLGTRYPGMHAWRSLIGVVSLGAWFYA IAHLPLATAMTLNYMSSVWIAAFIVGGALLAWRPSGGTGGTRPPLQAPLVMTVMAGFAGVVMMLRPSLDAHQMFAGLIGL LSGLSAAFAYMQVMALSRIGEPETRTVFYFAVGSAVAGGAAMLLTGASAWPGWPGLWLLPIGFLAAAGQLCMTRAYARAG SQRGTLVVANLQYSGIVFAGVYSVVLFGDDIPPIGWAGMALIIVSGIVATVLRARAAPGAPAEEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31940; Mature: 31940
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALWMVLAAFLFASMGVCVKMASEHFNAAELVCYRGIIGMAILWALARRQGVGLGTRYP CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GMHAWRSLIGVVSLGAWFYAIAHLPLATAMTLNYMSSVWIAAFIVGGALLAWRPSGGTGG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCCCC TRPPLQAPLVMTVMAGFAGVVMMLRPSLDAHQMFAGLIGLLSGLSAAFAYMQVMALSRIG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPETRTVFYFAVGSAVAGGAAMLLTGASAWPGWPGLWLLPIGFLAAAGQLCMTRAYARAG CCCCCEEEEEEECHHHCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC SQRGTLVVANLQYSGIVFAGVYSVVLFGDDIPPIGWAGMALIIVSGIVATVLRARAAPGA CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC PAEEH CCCCC >Mature Secondary Structure MQALWMVLAAFLFASMGVCVKMASEHFNAAELVCYRGIIGMAILWALARRQGVGLGTRYP CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GMHAWRSLIGVVSLGAWFYAIAHLPLATAMTLNYMSSVWIAAFIVGGALLAWRPSGGTGG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCCCC TRPPLQAPLVMTVMAGFAGVVMMLRPSLDAHQMFAGLIGLLSGLSAAFAYMQVMALSRIG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPETRTVFYFAVGSAVAGGAAMLLTGASAWPGWPGLWLLPIGFLAAAGQLCMTRAYARAG CCCCCEEEEEEECHHHCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC SQRGTLVVANLQYSGIVFAGVYSVVLFGDDIPPIGWAGMALIIVSGIVATVLRARAAPGA CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC PAEEH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA