Click here to switch to the map view.

The map label for this gene is 120610643

Identifier: 120610643

GI number: 120610643

Start: 2133811

End: 2134338

Strand: Direct

Name: 120610643

Synonym: Aave_1963

Alternate gene names: NA

Gene position: 2133811-2134338 (Clockwise)

Preceding gene: 120610642

Following gene: 120610644

Centisome position: 39.86

GC content: 71.02

Gene sequence:

>528_bases
ATGATCTTCCTCCGTTACGCCGTGGCCGCGGGCGCGGCCTTTCTCGCCTGCGGCGGCCTGCCGGGCGCCATCGTGCCTGC
CCATGCGCAGGACGCGCCGCCGACCCAGGCCCTCCTCATTCCCCCGCCGGTCCCGCGCCAGCCGGTCGATACCTCGGTGC
TGCCGGCACCCCCCGGCCTCTACGAAGCGCTGGGCGGGCGCGAGCGCATCGCCCGCGTGGTGGACCGGCTCATCGATGCC
GCCGTCGTGCATCCGCAGATCGGCCCGATCTTCAAGGGGGTGCGCCCGCGCGCGCTCAAGGACAGCATCGCCGCGCAACT
GTGCGTGGTGACCGGCGGGCCCTGCGAATACGAAGGCGTCAGCATGAAGGACGCCCATGCCGACCTGCGCATCCGCCGGA
GCGATTTCAACGTGCTGGTGGAATTGCTGCAGGATGCCATGGACGCCGAGGGCATTCCCTTCGCGCAGCAGAGCCGGCTG
CTGGCGCTCCTGGCGCCCATGCACCGCGACATCATCACCGTCCGCTGA

Upstream 100 bases:

>100_bases
CTGGGCCGCGTCGTGCCCGGCGTGACCGCCTACCGGCGCCAGCGCGGCGCCTACCTGTCGCTGCAGGCGGCCTACTGACA
TGCGCGGCAGGAACCACTCC

Downstream 100 bases:

>100_bases
ACGAATGCCCGGGCCGCGGCGGGGCACGCCGCGGTGCGCTGCAGGCGCCGGGCGGGCGCGGCACAATGCGTTCCGTGAGC
GCATCCCCTGACACGTCCGC

Product: globin

Products: NA

Alternate protein names: Protozoan/Cyanobacterial Globin Family Protein; Cyanoglobin Family Protein; Cyanoglobin; Globin Family Protein; Hemoglobin-Like Protein; Globin Protein; Truncated Hemoglobin; Protozoan/Cyanobacterial Globin Protein; Hemoglobin Domain Protein; Hemoglobin-Like Protein HBN; Globin Lipoprotein

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MIFLRYAVAAGAAFLACGGLPGAIVPAHAQDAPPTQALLIPPPVPRQPVDTSVLPAPPGLYEALGGRERIARVVDRLIDA
AVVHPQIGPIFKGVRPRALKDSIAAQLCVVTGGPCEYEGVSMKDAHADLRIRRSDFNVLVELLQDAMDAEGIPFAQQSRL
LALLAPMHRDIITVR

Sequences:

>Translated_175_residues
MIFLRYAVAAGAAFLACGGLPGAIVPAHAQDAPPTQALLIPPPVPRQPVDTSVLPAPPGLYEALGGRERIARVVDRLIDA
AVVHPQIGPIFKGVRPRALKDSIAAQLCVVTGGPCEYEGVSMKDAHADLRIRRSDFNVLVELLQDAMDAEGIPFAQQSRL
LALLAPMHRDIITVR
>Mature_175_residues
MIFLRYAVAAGAAFLACGGLPGAIVPAHAQDAPPTQALLIPPPVPRQPVDTSVLPAPPGLYEALGGRERIARVVDRLIDA
AVVHPQIGPIFKGVRPRALKDSIAAQLCVVTGGPCEYEGVSMKDAHADLRIRRSDFNVLVELLQDAMDAEGIPFAQQSRL
LALLAPMHRDIITVR

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18649; Mature: 18649

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLRYAVAAGAAFLACGGLPGAIVPAHAQDAPPTQALLIPPPVPRQPVDTSVLPAPPGL
CEEEEHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCH
YEALGGRERIARVVDRLIDAAVVHPQIGPIFKGVRPRALKDSIAAQLCVVTGGPCEYEGV
HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHEEEEEECCCCCCCCC
SMKDAHADLRIRRSDFNVLVELLQDAMDAEGIPFAQQSRLLALLAPMHRDIITVR
CCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MIFLRYAVAAGAAFLACGGLPGAIVPAHAQDAPPTQALLIPPPVPRQPVDTSVLPAPPGL
CEEEEHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCH
YEALGGRERIARVVDRLIDAAVVHPQIGPIFKGVRPRALKDSIAAQLCVVTGGPCEYEGV
HHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHEEEEEECCCCCCCCC
SMKDAHADLRIRRSDFNVLVELLQDAMDAEGIPFAQQSRLLALLAPMHRDIITVR
CCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA