| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610624
Identifier: 120610624
GI number: 120610624
Start: 2105384
End: 2106334
Strand: Direct
Name: 120610624
Synonym: Aave_1944
Alternate gene names: NA
Gene position: 2105384-2106334 (Clockwise)
Preceding gene: 120610623
Following gene: 120610626
Centisome position: 39.33
GC content: 70.14
Gene sequence:
>951_bases TTGCGCTTTCCTGGCGGGCCGGATGCCGGCCGCGGCAAGCCCTGTGTTTTCGAGAATCGAGCGCGTACAGCTATGACTTT GATCGCAATCATCCTGGCCACCCTGGCCGCGGGTATCGGCAGCGTGTGGGTGGCGGCCCTGCTCATGCGGGCCGGCTGGG GGGACGGCCGCTCGGGCATCGGCCCGCGGCACCTCCTGAGCTTCGCCGCCGGCGCGCTGCTGGCCACGGCCTTCATGCAT TTGCTACCCGAGGCCTTCGAGAGCCAGGCCGGCGCGCACGAACTCTTCGCCACGCTGCTGGTGGGGCTGGTCTTCTTCTT CCTGCTGGACAAGGCGGAGCTCTGGCACCACGGCCACGAGCACGGCGTGGGGCCGGCCAACGACGACCCGGGTACGGGGG GAGGGCACGCGCACGCCCATGGACACACCCACGATGGCCACGGGCACGATGCACACGGCCATGGGCACCACTCCCACGCC CATTCCCACTCGCATCGCGGCTCCGGCGGCTGGGCCCTGCTCACGGGCGACAGCGTCCACTGCTTCGGCGACGGTGTCCT GATTGCCTCCGCCTTCCTGGCCGACCTGCGCCTGGGCGCCATCGCCGCGCTGGCCGTCCTGGCCCACGAAGTGCCGCACC ACATGGGCGATCTGGTGGTGCTGCGCCAGTCCAGCGGCGACCGGCGCGCGGCCCTGGTCAAGGTGTCCCTGGCCGGAGCG GTCACCGCGCTCGGGGGCGTGGTGGGCTATTTCCTGGTGGGCGAGCTGCAGGACTGGCTGCCGTATTTCCTGGCCATCGC GTCCAGCAGCTTCGTCTATGTGGCGCTGGCCGACCTCATCCCCCAATTGCAAAAGCGCCTGACGGCCGCGCAGACGCTGG CGCAGATCGCGTGGCTGCTGGGGGGCATGGCGGTGGTCACGCTGGTGAGCGGGATGGCGCACGCACATTAA
Upstream 100 bases:
>100_bases GAAGCGCGCGCTGGCGTGGTTCAAGGCGCACGGCGTGGGCTGACGCGCCGCCCCGCCGGGCGCCGCGTTCCGCAGCAAAG CCCTTCGGGGCTTTTTTCGT
Downstream 100 bases:
>100_bases GGGGCACCCCCCTGAGCGGCTTCGCCGCCTCCCCCCTCTCTCGCCATGCTGCGCATGGCGGGCGGGGGGACGCAGCCCTC GCTGCGGGGGGCCCTTGCTT
Product: zinc/iron permease
Products: NA
Alternate protein names: ZIP Zinc Transporter; Zinc Transporter ZIP; Metal Cation Transporter ZIP Family; Transmembrane Protein; Zinc Transporter; Zinc Transporter Foi; ZIP Zinc Transporter Family; Divalent Heavy-Metal Cations Transporter
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MRFPGGPDAGRGKPCVFENRARTAMTLIAIILATLAAGIGSVWVAALLMRAGWGDGRSGIGPRHLLSFAAGALLATAFMH LLPEAFESQAGAHELFATLLVGLVFFFLLDKAELWHHGHEHGVGPANDDPGTGGGHAHAHGHTHDGHGHDAHGHGHHSHA HSHSHRGSGGWALLTGDSVHCFGDGVLIASAFLADLRLGAIAALAVLAHEVPHHMGDLVVLRQSSGDRRAALVKVSLAGA VTALGGVVGYFLVGELQDWLPYFLAIASSSFVYVALADLIPQLQKRLTAAQTLAQIAWLLGGMAVVTLVSGMAHAH
Sequences:
>Translated_316_residues MRFPGGPDAGRGKPCVFENRARTAMTLIAIILATLAAGIGSVWVAALLMRAGWGDGRSGIGPRHLLSFAAGALLATAFMH LLPEAFESQAGAHELFATLLVGLVFFFLLDKAELWHHGHEHGVGPANDDPGTGGGHAHAHGHTHDGHGHDAHGHGHHSHA HSHSHRGSGGWALLTGDSVHCFGDGVLIASAFLADLRLGAIAALAVLAHEVPHHMGDLVVLRQSSGDRRAALVKVSLAGA VTALGGVVGYFLVGELQDWLPYFLAIASSSFVYVALADLIPQLQKRLTAAQTLAQIAWLLGGMAVVTLVSGMAHAH >Mature_316_residues MRFPGGPDAGRGKPCVFENRARTAMTLIAIILATLAAGIGSVWVAALLMRAGWGDGRSGIGPRHLLSFAAGALLATAFMH LLPEAFESQAGAHELFATLLVGLVFFFLLDKAELWHHGHEHGVGPANDDPGTGGGHAHAHGHTHDGHGHDAHGHGHHSHA HSHSHRGSGGWALLTGDSVHCFGDGVLIASAFLADLRLGAIAALAVLAHEVPHHMGDLVVLRQSSGDRRAALVKVSLAGA VTALGGVVGYFLVGELQDWLPYFLAIASSSFVYVALADLIPQLQKRLTAAQTLAQIAWLLGGMAVVTLVSGMAHAH
Specific function: Unknown
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40255101, Length=272, Percent_Identity=29.0441176470588, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI190014617, Length=279, Percent_Identity=28.3154121863799, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI187936949, Length=178, Percent_Identity=28.6516853932584, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI55741750, Length=178, Percent_Identity=28.6516853932584, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI153252201, Length=113, Percent_Identity=31.858407079646, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI223633937, Length=130, Percent_Identity=30, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI223633939, Length=269, Percent_Identity=24.1635687732342, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI205830407, Length=157, Percent_Identity=29.2993630573248, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI24586665, Length=157, Percent_Identity=29.2993630573248, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI205830403, Length=157, Percent_Identity=29.2993630573248, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71998183, Length=153, Percent_Identity=32.6797385620915, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71992548, Length=324, Percent_Identity=25.3086419753086, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17538884, Length=219, Percent_Identity=22.3744292237443, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71994730, Length=304, Percent_Identity=25.9868421052632, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24651189, Length=290, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24651193, Length=290, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24651187, Length=290, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24651191, Length=290, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24651195, Length=290, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24651197, Length=290, Percent_Identity=25.8620689655172, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI45549201, Length=141, Percent_Identity=31.2056737588652, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864610, Length=167, Percent_Identity=26.3473053892216, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI161083817, Length=114, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24664383, Length=114, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32912; Mature: 32912
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPGGPDAGRGKPCVFENRARTAMTLIAIILATLAAGIGSVWVAALLMRAGWGDGRSGI CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPRHLLSFAAGALLATAFMHLLPEAFESQAGAHELFATLLVGLVFFFLLDKAELWHHGHE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HGVGPANDDPGTGGGHAHAHGHTHDGHGHDAHGHGHHSHAHSHSHRGSGGWALLTGDSVH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEE CFGDGVLIASAFLADLRLGAIAALAVLAHEVPHHMGDLVVLRQSSGDRRAALVKVSLAGA ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHEEEHHHHHH VTALGGVVGYFLVGELQDWLPYFLAIASSSFVYVALADLIPQLQKRLTAAQTLAQIAWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGMAVVTLVSGMAHAH HHHHHHHHHHHHHCCC >Mature Secondary Structure MRFPGGPDAGRGKPCVFENRARTAMTLIAIILATLAAGIGSVWVAALLMRAGWGDGRSGI CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPRHLLSFAAGALLATAFMHLLPEAFESQAGAHELFATLLVGLVFFFLLDKAELWHHGHE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HGVGPANDDPGTGGGHAHAHGHTHDGHGHDAHGHGHHSHAHSHSHRGSGGWALLTGDSVH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEE CFGDGVLIASAFLADLRLGAIAALAVLAHEVPHHMGDLVVLRQSSGDRRAALVKVSLAGA ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHEEEHHHHHH VTALGGVVGYFLVGELQDWLPYFLAIASSSFVYVALADLIPQLQKRLTAAQTLAQIAWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGMAVVTLVSGMAHAH HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA