| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610606
Identifier: 120610606
GI number: 120610606
Start: 2086860
End: 2088815
Strand: Reverse
Name: 120610606
Synonym: Aave_1926
Alternate gene names: NA
Gene position: 2088815-2086860 (Counterclockwise)
Preceding gene: 120610607
Following gene: 120610605
Centisome position: 39.02
GC content: 66.21
Gene sequence:
>1956_bases ATGTCCCACACCCCGATGCCCTCCCGCCGCAAGGCCCTGCAATTCCTGGCCGGCGTGCCCCTGCTGCCCCTGGGCGCCAG CGCATCCGCCGCCTCCCTGCTGGCTGCCTGCGGCGGCGGCAGCGACGGCCCTGCTCCCAACTTCGCGTCCGCCAGCTTCA CGTCGATGGCCGCGCCTTCGCTCACCACGCCCGCCGCGATGGCGACGACCACCGTGGGCTCCACGCTGAACGTGAAGTTC AGCGACGATTCGGTCCAGAGCTACCAGCTCGCCTACCAGCCCTTCTTCGTCACCGGCGACCGCGTGTCCGACGGCAAGGG CGGCACGATCCTCGCCGGCGGCTACGTGGACATCAACAACCAGCCCATCATCGACACGACCGTGGCCGGCAAGGAGCGCC AGTTCTTCTCCGACTCGCCCGACGGCACCTCGCTGCTCACCGTGCCCAACGCCAAGGTGGACGGCGTGAAGGGCAACCCC GTGTTCGCCGTGGTGCAGTTCGAATACACCACCTGGGCACAGGACGGCAAGACCGACATGTACGGCAAGCTGCCCTCCCC CATCGCCGTGCTCTCGCTCGACCAGGACCCCGCCACCGGCAAGCTCACGCTCGTGAAGTACCACAACGTGGACACCTCCA AGGTGCACGGCCTGTGGATCACCTGCGGCGCGAGCCTCTCGCCCTGGGGCACGCACCTGTCCAGCGAAGAGTACGAGCCC GATGCGTTCACGGCTGCCTCGAGCGCGCAGTTCAAGGCCTACAGCAAGAACCTGTACGGCAGCGAGACGGCCACCAATCC CTACCACTACGGCCACATGCCCGAAGTGACGGTGAACCCGGACGGCACCGCCTCCATCAGGAAGCACTTCTGCATGGGCC GCATCTCCCATGAGCTGGTGCAGGTGATGCCCGACCAGCGCACCGCCCTCATGGGCGACGACGCCACCAACAGCGGCTAC TTCGTCTTCGTGGCCGACAAGGAAAAGGATCTGTCCTCCGGCACGCTGTACGCGGCCAAGGTGGGCGCAGGCTTCTCGAT CGACCCGGCCGCGAATTCCGCAGCCCCCCTCACCTGGATCAAGCTGGGCTCCGCCACCAGCGCGGAAATCGAGAAGCTCG CCAGCACCCTCAAGCCCACCGACATCATGTCCGTGTCCTCCACCGACCCGAAGGACACGAGCTACACGAAGATCGTCGCC AACGGCAAGACGGAGTGGATCAAGATCAACCCCGGCATGGAGAAGGCCGCCGCCTTCCTGGAAACCCACCGCTACGCGGC ATTCGTCGGTGCGAGCCTGGGCTTCACCAAGATGGAAGGCACCACCGTCAACGCCCGCGACAAGATCGCCTACTCGGCGC TGCAGAACGTGCAGTCGTCGATGGTGGCGGGCAACGCCGCCAACGTGCCGGGCAACGGCATCTCGGTGCCCAAGCAGCTG GCGGCCGGCGTGGTGATGGCGCTCAACCTGCGCGGTGGCCAGAAGGACACCCAGGGCAACGCCATCAACAGCGACTGGAT GCCCGTGGACACGAAGGCCCTGCTGGCCGGCGAGGACATCGCCGCCGACGCGCTGGGCAACACGGCCAACCCCAACAACA TCGCCAACCCGGACAACCTGAAGTTCTCGGAGAAGCTGCGCACCCTCTTCATCGGCGAGGACAGCAGCCAGCACGTGAAC AACTTCCTGTGGGCCTACAACGTGGACACGAAGCAGCTCTCGCGCATCATGTCGGTGCCGGCGGGCGGCGAATCCACCGG CCTGCACGCCGTGGACGAGATCAACGGCTTCACCTACATCATGAGCAACTTCCAGCACGCCGGCGACTGGGGCAGCATCC ACTCCAAGGTGAAGGACCAGCTCGACCCGCTGATCCGCGCCAACTACAAGGACAAGTTCGGCTCCGCAGTGGGATACCTG ACCGGCACGCCCCGGCAGATGAAGCTGGGCGCCTGA
Upstream 100 bases:
>100_bases GGGTTCGCCCGGCCTGCCCGACCGAGAGGCACGCGCCGCGCCGCTCCCACGGAGCCGGCAGCGATGCCCGCACCGCAGAC CGACCCATCCGGAATCCACG
Downstream 100 bases:
>100_bases CTTTCCGGACGGCATCGTCCGCAGGCATGCGCCGCGGATGTCGCGCGGCGCACCCCGCTCTTCCGCGAGGCCCCTTGGGG CCTCGCTTTTTTTTGTGCCG
Product: putative exported alkaline phosphatase
Products: NA
Alternate protein names: Phosphatase; Exported Alkaline Phosphatase; Phosphatase-Like Protein; Cell Surface Protein; Phosphatase Or Zinc Metalloprotease With Signal Peptide; Twin-Arginine Translocation Pathway Signal; PKD Domain Protein; Lipoprotein
Number of amino acids: Translated: 651; Mature: 650
Protein sequence:
>651_residues MSHTPMPSRRKALQFLAGVPLLPLGASASAASLLAACGGGSDGPAPNFASASFTSMAAPSLTTPAAMATTTVGSTLNVKF SDDSVQSYQLAYQPFFVTGDRVSDGKGGTILAGGYVDINNQPIIDTTVAGKERQFFSDSPDGTSLLTVPNAKVDGVKGNP VFAVVQFEYTTWAQDGKTDMYGKLPSPIAVLSLDQDPATGKLTLVKYHNVDTSKVHGLWITCGASLSPWGTHLSSEEYEP DAFTAASSAQFKAYSKNLYGSETATNPYHYGHMPEVTVNPDGTASIRKHFCMGRISHELVQVMPDQRTALMGDDATNSGY FVFVADKEKDLSSGTLYAAKVGAGFSIDPAANSAAPLTWIKLGSATSAEIEKLASTLKPTDIMSVSSTDPKDTSYTKIVA NGKTEWIKINPGMEKAAAFLETHRYAAFVGASLGFTKMEGTTVNARDKIAYSALQNVQSSMVAGNAANVPGNGISVPKQL AAGVVMALNLRGGQKDTQGNAINSDWMPVDTKALLAGEDIAADALGNTANPNNIANPDNLKFSEKLRTLFIGEDSSQHVN NFLWAYNVDTKQLSRIMSVPAGGESTGLHAVDEINGFTYIMSNFQHAGDWGSIHSKVKDQLDPLIRANYKDKFGSAVGYL TGTPRQMKLGA
Sequences:
>Translated_651_residues MSHTPMPSRRKALQFLAGVPLLPLGASASAASLLAACGGGSDGPAPNFASASFTSMAAPSLTTPAAMATTTVGSTLNVKF SDDSVQSYQLAYQPFFVTGDRVSDGKGGTILAGGYVDINNQPIIDTTVAGKERQFFSDSPDGTSLLTVPNAKVDGVKGNP VFAVVQFEYTTWAQDGKTDMYGKLPSPIAVLSLDQDPATGKLTLVKYHNVDTSKVHGLWITCGASLSPWGTHLSSEEYEP DAFTAASSAQFKAYSKNLYGSETATNPYHYGHMPEVTVNPDGTASIRKHFCMGRISHELVQVMPDQRTALMGDDATNSGY FVFVADKEKDLSSGTLYAAKVGAGFSIDPAANSAAPLTWIKLGSATSAEIEKLASTLKPTDIMSVSSTDPKDTSYTKIVA NGKTEWIKINPGMEKAAAFLETHRYAAFVGASLGFTKMEGTTVNARDKIAYSALQNVQSSMVAGNAANVPGNGISVPKQL AAGVVMALNLRGGQKDTQGNAINSDWMPVDTKALLAGEDIAADALGNTANPNNIANPDNLKFSEKLRTLFIGEDSSQHVN NFLWAYNVDTKQLSRIMSVPAGGESTGLHAVDEINGFTYIMSNFQHAGDWGSIHSKVKDQLDPLIRANYKDKFGSAVGYL TGTPRQMKLGA >Mature_650_residues SHTPMPSRRKALQFLAGVPLLPLGASASAASLLAACGGGSDGPAPNFASASFTSMAAPSLTTPAAMATTTVGSTLNVKFS DDSVQSYQLAYQPFFVTGDRVSDGKGGTILAGGYVDINNQPIIDTTVAGKERQFFSDSPDGTSLLTVPNAKVDGVKGNPV FAVVQFEYTTWAQDGKTDMYGKLPSPIAVLSLDQDPATGKLTLVKYHNVDTSKVHGLWITCGASLSPWGTHLSSEEYEPD AFTAASSAQFKAYSKNLYGSETATNPYHYGHMPEVTVNPDGTASIRKHFCMGRISHELVQVMPDQRTALMGDDATNSGYF VFVADKEKDLSSGTLYAAKVGAGFSIDPAANSAAPLTWIKLGSATSAEIEKLASTLKPTDIMSVSSTDPKDTSYTKIVAN GKTEWIKINPGMEKAAAFLETHRYAAFVGASLGFTKMEGTTVNARDKIAYSALQNVQSSMVAGNAANVPGNGISVPKQLA AGVVMALNLRGGQKDTQGNAINSDWMPVDTKALLAGEDIAADALGNTANPNNIANPDNLKFSEKLRTLFIGEDSSQHVNN FLWAYNVDTKQLSRIMSVPAGGESTGLHAVDEINGFTYIMSNFQHAGDWGSIHSKVKDQLDPLIRANYKDKFGSAVGYLT GTPRQMKLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68901; Mature: 68770
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTPMPSRRKALQFLAGVPLLPLGASASAASLLAACGGGSDGPAPNFASASFTSMAAPS CCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCC LTTPAAMATTTVGSTLNVKFSDDSVQSYQLAYQPFFVTGDRVSDGKGGTILAGGYVDINN CCCCHHHHHEECCCEEEEEECCCCCCEEEEEECEEEEECCEECCCCCCEEEECCEEECCC QPIIDTTVAGKERQFFSDSPDGTSLLTVPNAKVDGVKGNPVFAVVQFEYTTWAQDGKTDM CCEEEEECCCCCCHHCCCCCCCCEEEEECCCEECCCCCCCEEEEEEEEEEEECCCCCCCC YGKLPSPIAVLSLDQDPATGKLTLVKYHNVDTSKVHGLWITCGASLSPWGTHLSSEEYEP CCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC DAFTAASSAQFKAYSKNLYGSETATNPYHYGHMPEVTVNPDGTASIRKHFCMGRISHELV CCEECCCCCHHHHHHCCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH QVMPDQRTALMGDDATNSGYFVFVADKEKDLSSGTLYAAKVGAGFSIDPAANSAAPLTWI HHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCCCCEEEE KLGSATSAEIEKLASTLKPTDIMSVSSTDPKDTSYTKIVANGKTEWIKINPGMEKAAAFL EECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHH ETHRYAAFVGASLGFTKMEGTTVNARDKIAYSALQNVQSSMVAGNAANVPGNGISVPKQL HHHHHHEEHCCCCCCEECCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAGVVMALNLRGGQKDTQGNAINSDWMPVDTKALLAGEDIAADALGNTANPNNIANPDNL HCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCC KFSEKLRTLFIGEDSSQHVNNFLWAYNVDTKQLSRIMSVPAGGESTGLHAVDEINGFTYI CHHHHEEEEEECCCCHHHHHCEEEEEECCHHHHHHHHCCCCCCCCCCCEEHHHCCCEEEE MSNFQHAGDWGSIHSKVKDQLDPLIRANYKDKFGSAVGYLTGTPRQMKLGA HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCEEECCC >Mature Secondary Structure SHTPMPSRRKALQFLAGVPLLPLGASASAASLLAACGGGSDGPAPNFASASFTSMAAPS CCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCC LTTPAAMATTTVGSTLNVKFSDDSVQSYQLAYQPFFVTGDRVSDGKGGTILAGGYVDINN CCCCHHHHHEECCCEEEEEECCCCCCEEEEEECEEEEECCEECCCCCCEEEECCEEECCC QPIIDTTVAGKERQFFSDSPDGTSLLTVPNAKVDGVKGNPVFAVVQFEYTTWAQDGKTDM CCEEEEECCCCCCHHCCCCCCCCEEEEECCCEECCCCCCCEEEEEEEEEEEECCCCCCCC YGKLPSPIAVLSLDQDPATGKLTLVKYHNVDTSKVHGLWITCGASLSPWGTHLSSEEYEP CCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC DAFTAASSAQFKAYSKNLYGSETATNPYHYGHMPEVTVNPDGTASIRKHFCMGRISHELV CCEECCCCCHHHHHHCCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH QVMPDQRTALMGDDATNSGYFVFVADKEKDLSSGTLYAAKVGAGFSIDPAANSAAPLTWI HHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCCCCEEEE KLGSATSAEIEKLASTLKPTDIMSVSSTDPKDTSYTKIVANGKTEWIKINPGMEKAAAFL EECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHH ETHRYAAFVGASLGFTKMEGTTVNARDKIAYSALQNVQSSMVAGNAANVPGNGISVPKQL HHHHHHEEHCCCCCCEECCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAGVVMALNLRGGQKDTQGNAINSDWMPVDTKALLAGEDIAADALGNTANPNNIANPDNL HCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCC KFSEKLRTLFIGEDSSQHVNNFLWAYNVDTKQLSRIMSVPAGGESTGLHAVDEINGFTYI CHHHHEEEEEECCCCHHHHHCEEEEEECCHHHHHHHHCCCCCCCCCCCEEHHHCCCEEEE MSNFQHAGDWGSIHSKVKDQLDPLIRANYKDKFGSAVGYLTGTPRQMKLGA HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA