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The map label for this gene is ompA [C]

Identifier: 120610559

GI number: 120610559

Start: 2037491

End: 2038093

Strand: Reverse

Name: ompA [C]

Synonym: Aave_1879

Alternate gene names: 120610559

Gene position: 2038093-2037491 (Counterclockwise)

Preceding gene: 120610562

Following gene: 120610552

Centisome position: 38.08

GC content: 66.17

Gene sequence:

>603_bases
ATGCACACACCGAACCGTTCCCTCCGGCTGTTGTCCTGCGCCCTCGCCCTCGCCTGCGGCACCATGGCCGCCCATGCCCA
GGCCGGCCGCGCGACCGGCAACTCCTTCATCCCCGCCACGCAGCAGGGCTATATCGGCCTGAACGCCGGCCAATCCAAAT
ACGACCTGCGCAATGGCACGAGCCCCTTCGATTTCGACGACAGCGACACCGGCTGGAAGCTCTACACGGGCGGCTTCTTC
CATCCCAATGTCGGGGTGGAGTTCGGCTACCTGAATTTCGGCAAGGCCACCCGCCTCGGCGGGGACACCAAGGCACAGGG
GCTGAACTTCAGCCTGGTGGGCCGTGCACCGATCAGCGAACAGTTCGACATCTTCGGCAAGCTCGGCACGACCTACGGCC
GCACGAAGACCTCCGGCAATCCCGGTTTCGGCGTGGCCACGGGGGACGACAGCGGCTTCGGACTGTCCTATGGCGCGGGC
GTGCGCTGGGCGTTCAATCCCCAGTGGGCCGCCGTGCTGGAGTGGGAGCGCCACCGCCTGCATTTCGCCGACGGCAAGTC
GGATGTGGACATGACGACGATCGGCGTGCAGTACCGGTACTGA

Upstream 100 bases:

>100_bases
CCACGGCCCTTCCAATGGGCCCAAGGCCCGTCCGCGGGCCGAGGTGCAGCCTCCGATCCTGCCACCACCGCCCGTCTGTC
CTCCACCATAAGGAAAACCC

Downstream 100 bases:

>100_bases
TCCATCGCCCTCCCCTCGGAAACGCAAAAAGGCCCTTCGCAGGGCCTTTTTCTCGTCCATGGCGCAGGGCGCGCCGTCGT
GTCACTCGCCCAGGTAGGCG

Product: OmpA domain-containing protein

Products: NA

Alternate protein names: OmpA-Like Transmembrane Region; NB-Dependent Receptor Protein; OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; OmpA/MotB

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MHTPNRSLRLLSCALALACGTMAAHAQAGRATGNSFIPATQQGYIGLNAGQSKYDLRNGTSPFDFDDSDTGWKLYTGGFF
HPNVGVEFGYLNFGKATRLGGDTKAQGLNFSLVGRAPISEQFDIFGKLGTTYGRTKTSGNPGFGVATGDDSGFGLSYGAG
VRWAFNPQWAAVLEWERHRLHFADGKSDVDMTTIGVQYRY

Sequences:

>Translated_200_residues
MHTPNRSLRLLSCALALACGTMAAHAQAGRATGNSFIPATQQGYIGLNAGQSKYDLRNGTSPFDFDDSDTGWKLYTGGFF
HPNVGVEFGYLNFGKATRLGGDTKAQGLNFSLVGRAPISEQFDIFGKLGTTYGRTKTSGNPGFGVATGDDSGFGLSYGAG
VRWAFNPQWAAVLEWERHRLHFADGKSDVDMTTIGVQYRY
>Mature_200_residues
MHTPNRSLRLLSCALALACGTMAAHAQAGRATGNSFIPATQQGYIGLNAGQSKYDLRNGTSPFDFDDSDTGWKLYTGGFF
HPNVGVEFGYLNFGKATRLGGDTKAQGLNFSLVGRAPISEQFDIFGKLGTTYGRTKTSGNPGFGVATGDDSGFGLSYGAG
VRWAFNPQWAAVLEWERHRLHFADGKSDVDMTTIGVQYRY

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21553; Mature: 21553

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTPNRSLRLLSCALALACGTMAAHAQAGRATGNSFIPATQQGYIGLNAGQSKYDLRNGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCC
SPFDFDDSDTGWKLYTGGFFHPNVGVEFGYLNFGKATRLGGDTKAQGLNFSLVGRAPISE
CCCCCCCCCCCEEEEECCEECCCCCEEEEEEECCCEEECCCCCCCCCCCEEEEECCCCCC
QFDIFGKLGTTYGRTKTSGNPGFGVATGDDSGFGLSYGAGVRWAFNPQWAAVLEWERHRL
HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCEEEEECCCEEEEEEECCCEE
HFADGKSDVDMTTIGVQYRY
EECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MHTPNRSLRLLSCALALACGTMAAHAQAGRATGNSFIPATQQGYIGLNAGQSKYDLRNGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCC
SPFDFDDSDTGWKLYTGGFFHPNVGVEFGYLNFGKATRLGGDTKAQGLNFSLVGRAPISE
CCCCCCCCCCCEEEEECCEECCCCCEEEEEEECCCEEECCCCCCCCCCCEEEEECCCCCC
QFDIFGKLGTTYGRTKTSGNPGFGVATGDDSGFGLSYGAGVRWAFNPQWAAVLEWERHRL
HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCEEEEECCCEEEEEEECCCEE
HFADGKSDVDMTTIGVQYRY
EECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA