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The map label for this gene is 120610552

Identifier: 120610552

GI number: 120610552

Start: 2029489

End: 2030088

Strand: Reverse

Name: 120610552

Synonym: Aave_1872

Alternate gene names: NA

Gene position: 2030088-2029489 (Counterclockwise)

Preceding gene: 120610559

Following gene: 120610551

Centisome position: 37.93

GC content: 73.5

Gene sequence:

>600_bases
ATGCTGCGCCCCCAGCCCGATCTCGCCTCTCTTGTGCACAGCGTGCGCAATTGCACCCTGTGCGCTGGCAGCCTGCCCCT
CGGGCCGCGGCCCGTGCTGCAGGCCTCCGCCGGGGCGCGCATCCTCGTCGCGGGGCAGGCACCGGGCCGCAAGGTGCACG
CCAGCGGCATTCCCTTCGACGATGCGAGCGGCGAACGGCTGCGCGCCTGGATGGGGGTGGACCGGGACACGTTCTACGAC
CCCGGGCGCATCGCGATCGTCCCCATGGGCTTCTGCTACCCCGGCACCGGCCGTTCGGGCGACCTGCCGCCGCGCCCGGA
ATGCGCCTCCACCTGGCGCAAGCCGCTGCTGCAAGCCCTGCCCGGCATCCGCCTCACCATCGTGCTCGGCGCGCACGCCC
TCGCCTGGCACGGACGCCGCGCGCCTGCGCCGGCGTCGCTGACCGACGCCGTGCAGGACTGGCGCCGCGATGCGCCGGCG
CTATGGGTGCTGCCGCATCCCAGTCCGCGCAACAACGGCTGGCTGAAACGCCATCCGTGGTTCGCCGAAGAATTGCTGCC
CGCCCTGCGCCGCGGAGTGGCGGAAGTGCTCGCGGACTGA

Upstream 100 bases:

>100_bases
GGCCGCCGCACCCATTATTCCTGCAGGCGGTATCCTGCACCAATCCGGGGGCTCCGCGTTGCAGGCCGGCGCCGCGAGCA
TCCCCGCACCCTCCGACGAC

Downstream 100 bases:

>100_bases
ACGCTGCGGGTACGCGCAGCGCCGCGTGAGCGAAACCATGTGTGGGCCTGCGGAGCTAAACTCTGCGGCCGGGGAAGGCG
GGTCCGCCATGCGCCGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MLRPQPDLASLVHSVRNCTLCAGSLPLGPRPVLQASAGARILVAGQAPGRKVHASGIPFDDASGERLRAWMGVDRDTFYD
PGRIAIVPMGFCYPGTGRSGDLPPRPECASTWRKPLLQALPGIRLTIVLGAHALAWHGRRAPAPASLTDAVQDWRRDAPA
LWVLPHPSPRNNGWLKRHPWFAEELLPALRRGVAEVLAD

Sequences:

>Translated_199_residues
MLRPQPDLASLVHSVRNCTLCAGSLPLGPRPVLQASAGARILVAGQAPGRKVHASGIPFDDASGERLRAWMGVDRDTFYD
PGRIAIVPMGFCYPGTGRSGDLPPRPECASTWRKPLLQALPGIRLTIVLGAHALAWHGRRAPAPASLTDAVQDWRRDAPA
LWVLPHPSPRNNGWLKRHPWFAEELLPALRRGVAEVLAD
>Mature_199_residues
MLRPQPDLASLVHSVRNCTLCAGSLPLGPRPVLQASAGARILVAGQAPGRKVHASGIPFDDASGERLRAWMGVDRDTFYD
PGRIAIVPMGFCYPGTGRSGDLPPRPECASTWRKPLLQALPGIRLTIVLGAHALAWHGRRAPAPASLTDAVQDWRRDAPA
LWVLPHPSPRNNGWLKRHPWFAEELLPALRRGVAEVLAD

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 21595; Mature: 21595

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPQPDLASLVHSVRNCTLCAGSLPLGPRPVLQASAGARILVAGQAPGRKVHASGIPFD
CCCCCHHHHHHHHHHHHCEEEECCCCCCCCHHEECCCCCEEEEECCCCCCEEECCCCCCC
DASGERLRAWMGVDRDTFYDPGRIAIVPMGFCYPGTGRSGDLPPRPECASTWRKPLLQAL
CCCCHHHHHHHCCCCCCCCCCCCEEEEEECEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
PGIRLTIVLGAHALAWHGRRAPAPASLTDAVQDWRRDAPALWVLPHPSPRNNGWLKRHPW
CCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
FAEELLPALRRGVAEVLAD
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRPQPDLASLVHSVRNCTLCAGSLPLGPRPVLQASAGARILVAGQAPGRKVHASGIPFD
CCCCCHHHHHHHHHHHHCEEEECCCCCCCCHHEECCCCCEEEEECCCCCCEEECCCCCCC
DASGERLRAWMGVDRDTFYDPGRIAIVPMGFCYPGTGRSGDLPPRPECASTWRKPLLQAL
CCCCHHHHHHHCCCCCCCCCCCCEEEEEECEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
PGIRLTIVLGAHALAWHGRRAPAPASLTDAVQDWRRDAPALWVLPHPSPRNNGWLKRHPW
CCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
FAEELLPALRRGVAEVLAD
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]