| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610551
Identifier: 120610551
GI number: 120610551
Start: 2028957
End: 2029313
Strand: Reverse
Name: 120610551
Synonym: Aave_1871
Alternate gene names: NA
Gene position: 2029313-2028957 (Counterclockwise)
Preceding gene: 120610552
Following gene: 120610550
Centisome position: 37.91
GC content: 67.79
Gene sequence:
>357_bases ATGCATTTCGCTGCCCATGCCGTCGCGGCGCTGATCGCGCTGCTGCACATCTACATCCTGATACTGGAGATGTTCCTCTG GGACAAGCCGGCAGGCCTCAAGGCGTTCCGTAACACGCCGGAGCGCGCGGCGGACACGAAGGTGATGGCGGCCAACCAGG GTCTCTACAACGGCTTCCTCGCGGCCGGGCTGCTCTGGGGCCTCTGGCTCGGCGGACCGCACGGCCGCGCGGTCCTGACC TTCTTCCTGCTGTGCGTGCTGGTGGCCGGGCTCTACGGCGCCGCCACGGCGGCCCGCAAGATCCTGTTCATCCAGGCAGT GCCGGCCGCGCTGGGCCTGGCATTGCTCTGGATCTAG
Upstream 100 bases:
>100_bases AGGCGGGTCCGCCATGCGCCGGGCCATGGCCGCGCAGCGCGGACAATCACGCTTCGCGCGCCTGCCCGCAGGCCGCCCCC ATCCCTTCGGAGACCCATCC
Downstream 100 bases:
>100_bases CTGTGATGTCTCAATAGGTTGTTCATCCAGGCCCGACCTGGGAAGCTGTGGTTACCAGGCCCCAGCAACTCAGGACAGGA CACCGGATGAACAGTCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MHFAAHAVAALIALLHIYILILEMFLWDKPAGLKAFRNTPERAADTKVMAANQGLYNGFLAAGLLWGLWLGGPHGRAVLT FFLLCVLVAGLYGAATAARKILFIQAVPAALGLALLWI
Sequences:
>Translated_118_residues MHFAAHAVAALIALLHIYILILEMFLWDKPAGLKAFRNTPERAADTKVMAANQGLYNGFLAAGLLWGLWLGGPHGRAVLT FFLLCVLVAGLYGAATAARKILFIQAVPAALGLALLWI >Mature_118_residues MHFAAHAVAALIALLHIYILILEMFLWDKPAGLKAFRNTPERAADTKVMAANQGLYNGFLAAGLLWGLWLGGPHGRAVLT FFLLCVLVAGLYGAATAARKILFIQAVPAALGLALLWI
Specific function: Unknown
COG id: COG3759
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12668; Mature: 12668
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFAAHAVAALIALLHIYILILEMFLWDKPAGLKAFRNTPERAADTKVMAANQGLYNGFL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHH AAGLLWGLWLGGPHGRAVLTFFLLCVLVAGLYGAATAARKILFIQAVPAALGLALLWI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHFAAHAVAALIALLHIYILILEMFLWDKPAGLKAFRNTPERAADTKVMAANQGLYNGFL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHH AAGLLWGLWLGGPHGRAVLTFFLLCVLVAGLYGAATAARKILFIQAVPAALGLALLWI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA