| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610549
Identifier: 120610549
GI number: 120610549
Start: 2026715
End: 2027887
Strand: Reverse
Name: 120610549
Synonym: Aave_1869
Alternate gene names: NA
Gene position: 2027887-2026715 (Counterclockwise)
Preceding gene: 120610550
Following gene: 120610539
Centisome position: 37.88
GC content: 72.04
Gene sequence:
>1173_bases ATGCAAGATTCGCTCTTCGGCGACGACCTTCCGCCGCCTCCTGCGCCCTCTCCCGCACCGCCCGGGCCGGCCACCGAATC TCCCGCCGCCGCGCCACGCCGTCGGCCGCGGGCCGGTGGCGTCCACCCCATCGAGCCCGACCCCGGCCTGCTGGCCCTCG CCGCCGCCCTGCCCCAGCAGCTGCGGCTCGGCGGCTCCTCCTGGAGCTACCCCGGCTGGAAAGGCCTGGTCTGGGAAGGC GAGCACTCCGAATCCACCCTGGCGCGCCAGGGACTGGCCGCGTATGCACGGCACCCGCTGATGCGCACCGTGAGCATCGA CCGCGGTTTCTACAAGCCTCTCACCGTGAGCCAGTACGCGGGCTACGCCTCGCAGGTGCCCGACGACTTCCGCTTCATCG TGAAGGCGCCAAGCTTGGTGACCGATGCACTGGTGCGCGCCGAGGACGGCCGCGGGCGCGCGCCGAACCCGGCCTTCCTC GACCCCGCACTGGCACTCCAGGAATTCGTGGCGCCCGCGCTGGAAGGCCTGGGGGCCAAGATCGGAGCGTTGGTGTTCCA GTTGAGCCCCTTGCCGCTGGCGCAGCTCCATCGCCTCGAAGGCACCATCGCCCAGCTAGGCGCCCTGCTGCGCGCGATGC CGCCGCTCGCCCCCGCCGCACCGGACGGCGTGCTGGCCGTGGAGGTGCGCGATCCGGAGTGGCTGTCGCCGGAATACGAG CCGCTGTTCGCCGAAGCGCTGCTCTCGGCCGGCGCCACCTATTGCCTCGGGCTGCATGCCAAGATGCCGCCGCTCGAGGA GCAGTTGCGGCTGCTGCGCAGGCTGTGGCCGGGCCCGCTGGTGTGCCGCTGGAACCTCAACCCCGTGCATGGCGCCTACG GCTACGAAGAGGCCGAAGCGCTCTACAGCCCGTTCGACCGCGTCGTGCATCCCGCGCCGGAGGTGCATGCGCTGCTGGCG CGCACGCTGGCGGGCATCACCGGCAGGGGGCAGAACGCGTTCGTCGCGATCAGCAACCATGCGGAGGGCTGCGCGCCGAT CACCATTCGTACCCTGGCGGGCGAGGTGGCAGCGCTGCAGGGCCATCGCCCGCCCGCCAGTGCCGCGACAGGTGGCGACC CGGCACCGAACGCAGACGCAGACCCGGAATCCGACGACGGCTCCAAGGCCTGA
Upstream 100 bases:
>100_bases TCGGCCATCAGCCTCCCATCACACGCATTCCGGGTGTGAACAACCTCGTGAGACTCAACACCTAGCGCGGAAGGGAAGCT CCGATAAGATAAGGAGCCCC
Downstream 100 bases:
>100_bases CCACAAGGTGGGCGGCAGCGGCCGCCGCGAGCGCCCGCGCCGAGCGTTGCGCCAGCGCGGTGTCAGTGCCCCGAGTCCAC CCTGGCAGCCCTTGCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MQDSLFGDDLPPPPAPSPAPPGPATESPAAAPRRRPRAGGVHPIEPDPGLLALAAALPQQLRLGGSSWSYPGWKGLVWEG EHSESTLARQGLAAYARHPLMRTVSIDRGFYKPLTVSQYAGYASQVPDDFRFIVKAPSLVTDALVRAEDGRGRAPNPAFL DPALALQEFVAPALEGLGAKIGALVFQLSPLPLAQLHRLEGTIAQLGALLRAMPPLAPAAPDGVLAVEVRDPEWLSPEYE PLFAEALLSAGATYCLGLHAKMPPLEEQLRLLRRLWPGPLVCRWNLNPVHGAYGYEEAEALYSPFDRVVHPAPEVHALLA RTLAGITGRGQNAFVAISNHAEGCAPITIRTLAGEVAALQGHRPPASAATGGDPAPNADADPESDDGSKA
Sequences:
>Translated_390_residues MQDSLFGDDLPPPPAPSPAPPGPATESPAAAPRRRPRAGGVHPIEPDPGLLALAAALPQQLRLGGSSWSYPGWKGLVWEG EHSESTLARQGLAAYARHPLMRTVSIDRGFYKPLTVSQYAGYASQVPDDFRFIVKAPSLVTDALVRAEDGRGRAPNPAFL DPALALQEFVAPALEGLGAKIGALVFQLSPLPLAQLHRLEGTIAQLGALLRAMPPLAPAAPDGVLAVEVRDPEWLSPEYE PLFAEALLSAGATYCLGLHAKMPPLEEQLRLLRRLWPGPLVCRWNLNPVHGAYGYEEAEALYSPFDRVVHPAPEVHALLA RTLAGITGRGQNAFVAISNHAEGCAPITIRTLAGEVAALQGHRPPASAATGGDPAPNADADPESDDGSKA >Mature_390_residues MQDSLFGDDLPPPPAPSPAPPGPATESPAAAPRRRPRAGGVHPIEPDPGLLALAAALPQQLRLGGSSWSYPGWKGLVWEG EHSESTLARQGLAAYARHPLMRTVSIDRGFYKPLTVSQYAGYASQVPDDFRFIVKAPSLVTDALVRAEDGRGRAPNPAFL DPALALQEFVAPALEGLGAKIGALVFQLSPLPLAQLHRLEGTIAQLGALLRAMPPLAPAAPDGVLAVEVRDPEWLSPEYE PLFAEALLSAGATYCLGLHAKMPPLEEQLRLLRRLWPGPLVCRWNLNPVHGAYGYEEAEALYSPFDRVVHPAPEVHALLA RTLAGITGRGQNAFVAISNHAEGCAPITIRTLAGEVAALQGHRPPASAATGGDPAPNADADPESDDGSKA
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41189; Mature: 41189
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDSLFGDDLPPPPAPSPAPPGPATESPAAAPRRRPRAGGVHPIEPDPGLLALAAALPQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LRLGGSSWSYPGWKGLVWEGEHSESTLARQGLAAYARHPLMRTVSIDRGFYKPLTVSQYA HHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCHHHHC GYASQVPDDFRFIVKAPSLVTDALVRAEDGRGRAPNPAFLDPALALQEFVAPALEGLGAK CHHHHCCHHHEEEHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IGALVFQLSPLPLAQLHRLEGTIAQLGALLRAMPPLAPAAPDGVLAVEVRDPEWLSPEYE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC PLFAEALLSAGATYCLGLHAKMPPLEEQLRLLRRLWPGPLVCRWNLNPVHGAYGYEEAEA HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH LYSPFDRVVHPAPEVHALLARTLAGITGRGQNAFVAISNHAEGCAPITIRTLAGEVAALQ HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHC GHRPPASAATGGDPAPNADADPESDDGSKA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQDSLFGDDLPPPPAPSPAPPGPATESPAAAPRRRPRAGGVHPIEPDPGLLALAAALPQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LRLGGSSWSYPGWKGLVWEGEHSESTLARQGLAAYARHPLMRTVSIDRGFYKPLTVSQYA HHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCHHHHC GYASQVPDDFRFIVKAPSLVTDALVRAEDGRGRAPNPAFLDPALALQEFVAPALEGLGAK CHHHHCCHHHEEEHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IGALVFQLSPLPLAQLHRLEGTIAQLGALLRAMPPLAPAAPDGVLAVEVRDPEWLSPEYE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC PLFAEALLSAGATYCLGLHAKMPPLEEQLRLLRRLWPGPLVCRWNLNPVHGAYGYEEAEA HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH LYSPFDRVVHPAPEVHALLARTLAGITGRGQNAFVAISNHAEGCAPITIRTLAGEVAALQ HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHC GHRPPASAATGGDPAPNADADPESDDGSKA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA