| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is yaiE [C]
Identifier: 120610537
GI number: 120610537
Start: 2012922
End: 2013239
Strand: Reverse
Name: yaiE [C]
Synonym: Aave_1857
Alternate gene names: 120610537
Gene position: 2013239-2012922 (Counterclockwise)
Preceding gene: 120610538
Following gene: 120610536
Centisome position: 37.61
GC content: 64.15
Gene sequence:
>318_bases ATGACGACCGAAAAGATCGACGGCGTGTCCGTCACCGCCCGAGCCAACGTGTACTTCGACGGCAAGTGCGTGAGCCACGG CATCACCTTCCCCGACGGCACGAAGAAGTCGGTCGGCGTGATCCTGCCCGCCACCCTCACCTTCAACACGGGCGCGCCGG AGATCATGGAATGCGTGGGCGGCGCCTGCGAATACAAGCTGGACGGCACCGACGCCTGGGTGAAGTCCGGCGAGGGCGAC AAGTTCAGCGTGCCCGGCAACTCGAAGTTCGAGATCCGCGTGACCGAGGCCTACCACTACATCTGCCACTTCGGCTGA
Upstream 100 bases:
>100_bases CGGGGCCCTGCCGGGGCATCCCGTGTAGGACGCGGCCGGACACGCTCTAGAATCTTCGGCTTCCGCCCTCTTCCTTCCCC TTTCAGAGAACAGCGCATCC
Downstream 100 bases:
>100_bases TCCACGGCCGAGACCGCTCCACTGCCGCACCGACGCACCCGACACGACCCGAGATTTCCATGGCGACCATCCTCCAGAAC CTCCCCGCCGGCCAGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTTEKIDGVSVTARANVYFDGKCVSHGITFPDGTKKSVGVILPATLTFNTGAPEIMECVGGACEYKLDGTDAWVKSGEGD KFSVPGNSKFEIRVTEAYHYICHFG
Sequences:
>Translated_105_residues MTTEKIDGVSVTARANVYFDGKCVSHGITFPDGTKKSVGVILPATLTFNTGAPEIMECVGGACEYKLDGTDAWVKSGEGD KFSVPGNSKFEIRVTEAYHYICHFG >Mature_104_residues TTEKIDGVSVTARANVYFDGKCVSHGITFPDGTKKSVGVILPATLTFNTGAPEIMECVGGACEYKLDGTDAWVKSGEGDK FSVPGNSKFEIRVTEAYHYICHFG
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family
Homologues:
Organism=Escherichia coli, GI1786590, Length=91, Percent_Identity=35.1648351648352, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1857_ACIAC (A1TNA3)
Other databases:
- EMBL: CP000512 - RefSeq: YP_970215.1 - ProteinModelPortal: A1TNA3 - SMR: A1TNA3 - STRING: A1TNA3 - GeneID: 4669865 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1857 - NMPDR: fig|397945.5.peg.1607 - eggNOG: COG3123 - HOGENOM: HBG297920 - OMA: TFNTGAP - PhylomeDB: A1TNA3 - ProtClustDB: CLSK732384 - BioCyc: AAVE397945:AAVE_1857-MONOMER - HAMAP: MF_01537 - InterPro: IPR009664 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10
Pfam domain/function: PF06865 DUF1255
EC number: NA
Molecular weight: Translated: 11272; Mature: 11141
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEKIDGVSVTARANVYFDGKCVSHGITFPDGTKKSVGVILPATLTFNTGAPEIMECVG CCCCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHCC GACEYKLDGTDAWVKSGEGDKFSVPGNSKFEIRVTEAYHYICHFG CCEEEEECCCCCEEECCCCCEEECCCCCEEEEEEECEEEEEEECC >Mature Secondary Structure TTEKIDGVSVTARANVYFDGKCVSHGITFPDGTKKSVGVILPATLTFNTGAPEIMECVG CCCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHCC GACEYKLDGTDAWVKSGEGDKFSVPGNSKFEIRVTEAYHYICHFG CCEEEEECCCCCEEECCCCCEEECCCCCEEEEEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA