| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610475
Identifier: 120610475
GI number: 120610475
Start: 1944551
End: 1945045
Strand: Direct
Name: 120610475
Synonym: Aave_1794
Alternate gene names: NA
Gene position: 1944551-1945045 (Clockwise)
Preceding gene: 120610474
Following gene: 120610476
Centisome position: 36.33
GC content: 68.28
Gene sequence:
>495_bases ATGCGCAAGCTCGCTGATTGGGCGGCTCTGGACTGGGCGAAGCCCAATGCGGCTCTTGCCGCGGAGGTCGGCGCTTCAGT CCACACGGTTGCGAAGCGCCGCACTCAGCACGGCGTGCCAATGGCTTCGCCCACGTGGACGAGGCCCGACGTTGCCGCCA TCAACCGACGGCCCGAGCGCAGGGCACAGTCTGCTCGCACCCAGCCGGCCGCCACTGCGGCGGCCAAGCAGTCACCTGCA GCCGGGCGTGGCCCGGACAACGTCCATGCGCTGGACTGGGTGCTGGTGTCGCCCAGCGGCGAGCGCCACCAGGTGCGCAA CCTCTACGATTTCGTGCGCTCCCATTCAGCGCTGTTCGCCGAAGCTGACGTCGTTTGGAAGCGGACGGGCGGCAAGAGGG GAACGGGCGGGGAATGGTGCAACGCGACGGCCGGCATCCTCAACATCAAGGGCGGACGCGCCAAGAGCTGGAAGGGCTGG ACCCTTGCGCAATGA
Upstream 100 bases:
>100_bases ATCGGCGCGCTGGCGCGGGTCAAAGCTACAGGCATTCTGGTGATGATGCGGGCCGGGGTCGTGTCCACGCTCAACCAGCG CAAGGCGCAGGCGGCCCTGG
Downstream 100 bases:
>100_bases CCTCTGACGACCTCCGCGCCTGGCAGTCGGCCATGGGCTACACATACGACACCGCCGCCCGGGCGCTGGGCGTGAGCCGG GCCGCCTACGCGGACTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRKLADWAALDWAKPNAALAAEVGASVHTVAKRRTQHGVPMASPTWTRPDVAAINRRPERRAQSARTQPAATAAAKQSPA AGRGPDNVHALDWVLVSPSGERHQVRNLYDFVRSHSALFAEADVVWKRTGGKRGTGGEWCNATAGILNIKGGRAKSWKGW TLAQ
Sequences:
>Translated_164_residues MRKLADWAALDWAKPNAALAAEVGASVHTVAKRRTQHGVPMASPTWTRPDVAAINRRPERRAQSARTQPAATAAAKQSPA AGRGPDNVHALDWVLVSPSGERHQVRNLYDFVRSHSALFAEADVVWKRTGGKRGTGGEWCNATAGILNIKGGRAKSWKGW TLAQ >Mature_164_residues MRKLADWAALDWAKPNAALAAEVGASVHTVAKRRTQHGVPMASPTWTRPDVAAINRRPERRAQSARTQPAATAAAKQSPA AGRGPDNVHALDWVLVSPSGERHQVRNLYDFVRSHSALFAEADVVWKRTGGKRGTGGEWCNATAGILNIKGGRAKSWKGW TLAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17721; Mature: 17721
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLADWAALDWAKPNAALAAEVGASVHTVAKRRTQHGVPMASPTWTRPDVAAINRRPER CCCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHH RAQSARTQPAATAAAKQSPAAGRGPDNVHALDWVLVSPSGERHQVRNLYDFVRSHSALFA HHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH EADVVWKRTGGKRGTGGEWCNATAGILNIKGGRAKSWKGWTLAQ HHHEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRKLADWAALDWAKPNAALAAEVGASVHTVAKRRTQHGVPMASPTWTRPDVAAINRRPER CCCCHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHH RAQSARTQPAATAAAKQSPAAGRGPDNVHALDWVLVSPSGERHQVRNLYDFVRSHSALFA HHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH EADVVWKRTGGKRGTGGEWCNATAGILNIKGGRAKSWKGWTLAQ HHHEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA