| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610466
Identifier: 120610466
GI number: 120610466
Start: 1940519
End: 1941196
Strand: Direct
Name: 120610466
Synonym: Aave_1785
Alternate gene names: NA
Gene position: 1940519-1941196 (Clockwise)
Preceding gene: 120610465
Following gene: 120610467
Centisome position: 36.25
GC content: 68.29
Gene sequence:
>678_bases ATGATCGACATCGAGCAACTCATGTTCGCGGGCAACGCAGCACCTGGCCAGGTGGAGTTTCTCGCCTCGGCCACCTGGAT CGTTCCTCCGGGGGTGGAGTCGATCTCTATGGTCTGCGTGGAGACGGGCGGCTTCGGCAACGCCACCCAGGTTGTCGTCG GTGGCGTGATCGTCTGCCGCGCGCTCAACTTCGATCGGATCGGCGACGGAGGCGGGAATGGTGGCGCAGGAGGCGGGTGG GTGGATACGGGGACGCCCGGCGCGGACCCGTTGGCCGGGGGCGGGGGCGGTGCTGGTGGCTACACGGGGGACGGCGGCAA CGGTGCAACTTGGCCAAACGCCGCAGGCGCCGGGTCTGGCGGAGGAGGCGCGGGCGGGGCGTATGGCTACGGAGGCAAGG GCGTCGGCCTCAAGGGCACGGGAAGCACGCCGGGCAGCGATTCCAGTGGCGTATTCGGAGGCTCCTACGGTGGTGGCAAC GGCGGCCCTACCAGCACCAGCAATGGGTCGAGAGGCGGCGCGCTCGCGTGGAAAAACAACGTGGCTGTGGTCCCTGGCCA GGCCGTCACGATCACGGTATTTGTCCCGTCCGGGTCAGTGCTGCGCCAGGGTGCTGGCGCCGTGCGAATCATGTGGGGCG GAGGCCGCTCCTATCCCAACAACGCAGGAGACATGTGA
Upstream 100 bases:
>100_bases TCGCACCGTCGCTCACCACGGGACGGGTGCACCTTTTCATGTTCACAACGCGCAACGGCGGTACGACCTGGCGCGGCGCC GCACTGAGCAATTACCAGCC
Downstream 100 bases:
>100_bases TGTATTTGCACATCGAGACGGGGGCGTATCCGCTGACCGAGCAAGACGTGATCGCGCGACACCCGGAATGCTCTTTCCCG GTGCCGTTCTCGGCGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCRALNFDRIGDGGGNGGAGGGW VDTGTPGADPLAGGGGGAGGYTGDGGNGATWPNAAGAGSGGGGAGGAYGYGGKGVGLKGTGSTPGSDSSGVFGGSYGGGN GGPTSTSNGSRGGALAWKNNVAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM
Sequences:
>Translated_225_residues MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCRALNFDRIGDGGGNGGAGGGW VDTGTPGADPLAGGGGGAGGYTGDGGNGATWPNAAGAGSGGGGAGGAYGYGGKGVGLKGTGSTPGSDSSGVFGGSYGGGN GGPTSTSNGSRGGALAWKNNVAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM >Mature_225_residues MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCRALNFDRIGDGGGNGGAGGGW VDTGTPGADPLAGGGGGAGGYTGDGGNGATWPNAAGAGSGGGGAGGAYGYGGKGVGLKGTGSTPGSDSSGVFGGSYGGGN GGPTSTSNGSRGGALAWKNNVAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21161; Mature: 21161
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCR CCCHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHEEEEE ALNFDRIGDGGGNGGAGGGWVDTGTPGADPLAGGGGGAGGYTGDGGNGATWPNAAGAGSG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGAGGAYGYGGKGVGLKGTGSTPGSDSSGVFGGSYGGGNGGPTSTSNGSRGGALAWKNN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC VAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM EEEECCCEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCR CCCHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHEEEEE ALNFDRIGDGGGNGGAGGGWVDTGTPGADPLAGGGGGAGGYTGDGGNGATWPNAAGAGSG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGAGGAYGYGGKGVGLKGTGSTPGSDSSGVFGGSYGGGNGGPTSTSNGSRGGALAWKNN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC VAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM EEEECCCEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA