| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610456
Identifier: 120610456
GI number: 120610456
Start: 1929730
End: 1930062
Strand: Direct
Name: 120610456
Synonym: Aave_1775
Alternate gene names: NA
Gene position: 1929730-1930062 (Clockwise)
Preceding gene: 120610455
Following gene: 120610457
Centisome position: 36.05
GC content: 70.57
Gene sequence:
>333_bases ATGACGCTGGACGCAGGGGACCTGAACCGGCGCATCACCATCCAGCGCCGCGGCGAGGCGACCGACGCCTGGGGCTCTCC GGTGCCGGGAGCCGAGAACTGGGTCGAGGTCGGCAAGGCCTGGGCAAGCATCAAGACCCTCTCCGGCCTCGGTGCCATCA AGGCGGACGCGCAGGCGTCCACCGTCAAGGTATCCATCCGCGTGCGCTGGCGCACCGACCTGGCCGCGGGCATGCGCGTG CTCCACGGTGGCACGGTCTACGACGTGCAGGCAGTGCTGCCGGATGTCGCGGGCCGCGAGCACGTCGATCTGGTGTGCGA GGTGGGCCGATGA
Upstream 100 bases:
>100_bases ACCGCTACCCGAGCGGAGACGAGAAGAAGGCGTTCGACGACGGCCGGCTGCCGGCCCCGATCACCACGCTGCTCGCCCCG CTTCGCAGAAAGGTGCTCGT
Downstream 100 bases:
>100_bases GTTTCACGATCAATGCCGACACTGCCGGCCTGGAGAGCTACCTGGACGAACTGGGCGATGAAGCCGAAGCCGCTGTTCGC CCTGCCGCGCAGGCAGGCGC
Product: phage head-tail adaptor
Products: NA
Alternate protein names: Head-Tail Adaptor Protein
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTLDAGDLNRRITIQRRGEATDAWGSPVPGAENWVEVGKAWASIKTLSGLGAIKADAQASTVKVSIRVRWRTDLAAGMRV LHGGTVYDVQAVLPDVAGREHVDLVCEVGR
Sequences:
>Translated_110_residues MTLDAGDLNRRITIQRRGEATDAWGSPVPGAENWVEVGKAWASIKTLSGLGAIKADAQASTVKVSIRVRWRTDLAAGMRV LHGGTVYDVQAVLPDVAGREHVDLVCEVGR >Mature_109_residues TLDAGDLNRRITIQRRGEATDAWGSPVPGAENWVEVGKAWASIKTLSGLGAIKADAQASTVKVSIRVRWRTDLAAGMRVL HGGTVYDVQAVLPDVAGREHVDLVCEVGR
Specific function: Unknown
COG id: COG5614
COG function: function code R; Bacteriophage head-tail adaptor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11793; Mature: 11661
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDAGDLNRRITIQRRGEATDAWGSPVPGAENWVEVGKAWASIKTLSGLGAIKADAQAS CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE TVKVSIRVRWRTDLAAGMRVLHGGTVYDVQAVLPDVAGREHVDLVCEVGR EEEEEEEEEECCCHHHHHHHHCCCCEEEHHHHCCCCCCCCCEEEEEECCC >Mature Secondary Structure TLDAGDLNRRITIQRRGEATDAWGSPVPGAENWVEVGKAWASIKTLSGLGAIKADAQAS CCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE TVKVSIRVRWRTDLAAGMRVLHGGTVYDVQAVLPDVAGREHVDLVCEVGR EEEEEEEEEECCCHHHHHHHHCCCCEEEHHHHCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA