| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610454
Identifier: 120610454
GI number: 120610454
Start: 1928349
End: 1929416
Strand: Direct
Name: 120610454
Synonym: Aave_1773
Alternate gene names: NA
Gene position: 1928349-1929416 (Clockwise)
Preceding gene: 120610453
Following gene: 120610455
Centisome position: 36.03
GC content: 72.28
Gene sequence:
>1068_bases ATGCGACCCGACCTGAAAGCCCTGGCCGACGTCGTGATCCAGGCCGTGCGCGCCACGCTGGCGCCGCTGACCAAGCGGCT GCAGGAGATGGACGACGCCCTGAAGGCGCTGCCCGCGACCGTCACCAAGGACCTGGACCAACGCGTACAGGCCGCCGTTG CCGAGATCCCTCCGCCGAAGGATGGCAAGGATGCCGACCCGCAGGCGATCGCCGCGCTGGTAGCCAAGGCCGTGGGCGAG CTGCCGCCCGCGAAGGACGGGGCACCCGGCGTCAGCGTCACCTTGGATGACGTCGCGCCGCTGGTGGCGGAGGAGGTCGC GAAGGCAGTGGCGGCGCTCCCCCGGCCGAAGGATGGCGAGCCCGGCACGAGCGTGACGCCGGAGGATGTGGCGCCCATGG TCGCCGAGCAGGTGGCCAAGGCCGTGCAGGAGATCCCGGCGCCGCAAGACGGCAAGAGCTTGGCGCCCGAGGACGTCGCC CCCATGGTCGCGGAGATGGTGCAGGCCGCGGTGGCGGAGATCCCGCGCCCGAAGGACGGCGAGTCCGTGCCCGTCGGCGA GGTGCAGCGCATGGTCGACGAGGCGGTGAGCAAGGCGATGGCCGCCGTCGGCCCGCCGAAGGACGGCGCGCCCGGCCGCG ACGCGCTGCAGCTGGAGCTGCAGCCAGCAATCGACCTGGAGAAAACCTACCCGCGCGGCACGTACGCGCGGCATGCCGGC GGCCTGTGGCGCGCCTTCGAGGCTACCAAGGGTCTGCACGGCTGGGAGTGCGTGGTGGACGGCATCGCGCACCTGCAGAT CGAGCAGGACGGCCGCGAATTCACCCTCGTGGCGAAGACCTCCAGTGGCGACGAGGTGCGCAAGAGCGTCAAGGTCGCCG CGCTGGTGGACCGGGGCGTGTTCAGGGCGGGCGCCGAGTACGAGGCCGGCGACGGGGTGACCTGGGGCGGCTCGTTCTTC ATCGCCCAGAAGGACAGCCCGCGCGGTCACCCGGGCGAGCCCGGCTGCGACGGTTGGCGCCTGGCCGTGAAGCGCGGTCG CGACGGGACGAAGGGGGTTTCGGTATGA
Upstream 100 bases:
>100_bases CGGGCGCCGCACCGGCCGACGCCACGCCGCCGGCGGAGGCGGAGGAGATCAGCGAGGAGGACCGCAAGGCCCTCGCCGCG TACATCGAAAAGGAACTGGC
Downstream 100 bases:
>100_bases CGCCACTCGCAACGCTGGACCAGGTGAAGCAGCACCTGCGCATCGACGGCCCGGACGCGGACAGCGACCTGACGCTAAAG CTGGCCGCGGCGTCCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Portal Protein-Like Protein; Portal Protein; Portal V; Portal Protein Like Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MRPDLKALADVVIQAVRATLAPLTKRLQEMDDALKALPATVTKDLDQRVQAAVAEIPPPKDGKDADPQAIAALVAKAVGE LPPAKDGAPGVSVTLDDVAPLVAEEVAKAVAALPRPKDGEPGTSVTPEDVAPMVAEQVAKAVQEIPAPQDGKSLAPEDVA PMVAEMVQAAVAEIPRPKDGESVPVGEVQRMVDEAVSKAMAAVGPPKDGAPGRDALQLELQPAIDLEKTYPRGTYARHAG GLWRAFEATKGLHGWECVVDGIAHLQIEQDGREFTLVAKTSSGDEVRKSVKVAALVDRGVFRAGAEYEAGDGVTWGGSFF IAQKDSPRGHPGEPGCDGWRLAVKRGRDGTKGVSV
Sequences:
>Translated_355_residues MRPDLKALADVVIQAVRATLAPLTKRLQEMDDALKALPATVTKDLDQRVQAAVAEIPPPKDGKDADPQAIAALVAKAVGE LPPAKDGAPGVSVTLDDVAPLVAEEVAKAVAALPRPKDGEPGTSVTPEDVAPMVAEQVAKAVQEIPAPQDGKSLAPEDVA PMVAEMVQAAVAEIPRPKDGESVPVGEVQRMVDEAVSKAMAAVGPPKDGAPGRDALQLELQPAIDLEKTYPRGTYARHAG GLWRAFEATKGLHGWECVVDGIAHLQIEQDGREFTLVAKTSSGDEVRKSVKVAALVDRGVFRAGAEYEAGDGVTWGGSFF IAQKDSPRGHPGEPGCDGWRLAVKRGRDGTKGVSV >Mature_355_residues MRPDLKALADVVIQAVRATLAPLTKRLQEMDDALKALPATVTKDLDQRVQAAVAEIPPPKDGKDADPQAIAALVAKAVGE LPPAKDGAPGVSVTLDDVAPLVAEEVAKAVAALPRPKDGEPGTSVTPEDVAPMVAEQVAKAVQEIPAPQDGKSLAPEDVA PMVAEMVQAAVAEIPRPKDGESVPVGEVQRMVDEAVSKAMAAVGPPKDGAPGRDALQLELQPAIDLEKTYPRGTYARHAG GLWRAFEATKGLHGWECVVDGIAHLQIEQDGREFTLVAKTSSGDEVRKSVKVAALVDRGVFRAGAEYEAGDGVTWGGSFF IAQKDSPRGHPGEPGCDGWRLAVKRGRDGTKGVSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37110; Mature: 37110
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPDLKALADVVIQAVRATLAPLTKRLQEMDDALKALPATVTKDLDQRVQAAVAEIPPPK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGKDADPQAIAALVAKAVGELPPAKDGAPGVSVTLDDVAPLVAEEVAKAVAALPRPKDGE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCC PGTSVTPEDVAPMVAEQVAKAVQEIPAPQDGKSLAPEDVAPMVAEMVQAAVAEIPRPKDG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC ESVPVGEVQRMVDEAVSKAMAAVGPPKDGAPGRDALQLELQPAIDLEKTYPRGTYARHAG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCHHHHCC GLWRAFEATKGLHGWECVVDGIAHLQIEQDGREFTLVAKTSSGDEVRKSVKVAALVDRGV CHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH FRAGAEYEAGDGVTWGGSFFIAQKDSPRGHPGEPGCDGWRLAVKRGRDGTKGVSV HHCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRPDLKALADVVIQAVRATLAPLTKRLQEMDDALKALPATVTKDLDQRVQAAVAEIPPPK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGKDADPQAIAALVAKAVGELPPAKDGAPGVSVTLDDVAPLVAEEVAKAVAALPRPKDGE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCC PGTSVTPEDVAPMVAEQVAKAVQEIPAPQDGKSLAPEDVAPMVAEMVQAAVAEIPRPKDG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC ESVPVGEVQRMVDEAVSKAMAAVGPPKDGAPGRDALQLELQPAIDLEKTYPRGTYARHAG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCHHHHCC GLWRAFEATKGLHGWECVVDGIAHLQIEQDGREFTLVAKTSSGDEVRKSVKVAALVDRGV CHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH FRAGAEYEAGDGVTWGGSFFIAQKDSPRGHPGEPGCDGWRLAVKRGRDGTKGVSV HHCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA