| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610448
Identifier: 120610448
GI number: 120610448
Start: 1921149
End: 1921778
Strand: Direct
Name: 120610448
Synonym: Aave_1765
Alternate gene names: NA
Gene position: 1921149-1921778 (Clockwise)
Preceding gene: 120610447
Following gene: 120610449
Centisome position: 35.89
GC content: 58.73
Gene sequence:
>630_bases ATGATCGAGATCAGCGCCAGGAGGCCAAACTCGCGAAGTGTCGGCACGGCTGTGGCAGCGGATTGGTTCGGTAGAGGCAG CCCAATATTGATGACGATCGTGTCACCGGAGGGTAGCGTCTATTACATTGGAGCTATGCCAGATCCAACTGCCATCCGAG AGGCCCCGATCGTGCCCGCCCTGCTGTATTCGGTCTTCAGCAAAAGGCGGTACGTTGAACTGTCCATCCAGCAAACACTG TGGGTGAACCTGAAAGCCGCCGATTTGCGCGCTAAGTACGAACGTGGAGAGTGGCCCACCCAGGATGACATCGACGAGCA GGATGGCGCGCACGGATTTTCCAGGACGGTTCTTCTACGACGGCTATTCAAGCCGGCAGCCTTCGGTGTCTTAGCCTGCG CGATCGCAGTCGTTATCGGCATACCGTTCGGCTTAACGGGGCTATCGGTTGCAAAGCGATTTGGGCTTGCCGCCGGTGCC CTGGGGCTGTGGGCCGGGCTTATTCAGCTCGACATGCCAGGACAGAGTTGGAAGGGCAAGGGGTTAGATGAGATAGTCGC CAGGGCTGTAGTAAAGGCGCTGGTGTTTGTCGCCGCGGTGCTTGCCCTGGTTGCGGGGATACTGCCGTAG
Upstream 100 bases:
>100_bases TAGCGGATGGTCACTCAGGCGTGGTTAGCTTGTGGCCGGCTGAGGGCACACTGCTCATTTCGGCGCTCGATGCTTTGCTG CTCTGAGGCCCAAGATCGCC
Downstream 100 bases:
>100_bases GTGCAGGGTAGACGGCTTGAGCCGTCGCTACCATTGGGCGCAGCGGCTTTCGCGCGGTTCGAGCGTCCTACCGGAAAAAT TTGGGAAGCTACAGTAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIEISARRPNSRSVGTAVAADWFGRGSPILMTIVSPEGSVYYIGAMPDPTAIREAPIVPALLYSVFSKRRYVELSIQQTL WVNLKAADLRAKYERGEWPTQDDIDEQDGAHGFSRTVLLRRLFKPAAFGVLACAIAVVIGIPFGLTGLSVAKRFGLAAGA LGLWAGLIQLDMPGQSWKGKGLDEIVARAVVKALVFVAAVLALVAGILP
Sequences:
>Translated_209_residues MIEISARRPNSRSVGTAVAADWFGRGSPILMTIVSPEGSVYYIGAMPDPTAIREAPIVPALLYSVFSKRRYVELSIQQTL WVNLKAADLRAKYERGEWPTQDDIDEQDGAHGFSRTVLLRRLFKPAAFGVLACAIAVVIGIPFGLTGLSVAKRFGLAAGA LGLWAGLIQLDMPGQSWKGKGLDEIVARAVVKALVFVAAVLALVAGILP >Mature_209_residues MIEISARRPNSRSVGTAVAADWFGRGSPILMTIVSPEGSVYYIGAMPDPTAIREAPIVPALLYSVFSKRRYVELSIQQTL WVNLKAADLRAKYERGEWPTQDDIDEQDGAHGFSRTVLLRRLFKPAAFGVLACAIAVVIGIPFGLTGLSVAKRFGLAAGA LGLWAGLIQLDMPGQSWKGKGLDEIVARAVVKALVFVAAVLALVAGILP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22389; Mature: 22389
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEISARRPNSRSVGTAVAADWFGRGSPILMTIVSPEGSVYYIGAMPDPTAIREAPIVPA CEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHCCCHHH LLYSVFSKRRYVELSIQQTLWVNLKAADLRAKYERGEWPTQDDIDEQDGAHGFSRTVLLR HHHHHHCCCCEEEEEEEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RLFKPAAFGVLACAIAVVIGIPFGLTGLSVAKRFGLAAGALGLWAGLIQLDMPGQSWKGK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GLDEIVARAVVKALVFVAAVLALVAGILP CHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIEISARRPNSRSVGTAVAADWFGRGSPILMTIVSPEGSVYYIGAMPDPTAIREAPIVPA CEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHCCCHHH LLYSVFSKRRYVELSIQQTLWVNLKAADLRAKYERGEWPTQDDIDEQDGAHGFSRTVLLR HHHHHHCCCCEEEEEEEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RLFKPAAFGVLACAIAVVIGIPFGLTGLSVAKRFGLAAGALGLWAGLIQLDMPGQSWKGK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GLDEIVARAVVKALVFVAAVLALVAGILP CHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA