| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610446
Identifier: 120610446
GI number: 120610446
Start: 1919292
End: 1919786
Strand: Direct
Name: 120610446
Synonym: Aave_1763
Alternate gene names: NA
Gene position: 1919292-1919786 (Clockwise)
Preceding gene: 120610445
Following gene: 120610447
Centisome position: 35.86
GC content: 72.32
Gene sequence:
>495_bases ATGCGGCGGACTGGATTCCGGCGGGCAGCGCGGTCCAATGAGCCGGGGCTCGATCGGGAGCAGCGGCTTGCCGATCGCGC GGCGCGCGCCATGGCGGAGGTGCGGCCCCGGGCCTCGGTGGTGATGCCGTGCGGCGATCTGGCGCCGTCCGTGCCCAAGG CGGCACCGGTGCGCAGCGAGGCCTACCGCCGGCTGGTCGCCGCTCTCCCGTGCATGGCCTGCGGCATGCCGGGGCTCTCG CAGTGCGCGCACGCCAACACCGGCAAGGGCATGGGGCTCAAGGTCTGCGACCTGGAGAGCTTTCCCCTGTGCTCCGACCG CCCGGGCACGCCCGGCTGCCACAGCCTTTTCGACCAGGGGGCTTTGCTGAGCAAGGCCGCGCGCCGCGCGATTGAGCCGG CATGGATCGCTGACACGCAGCGCCGCATCATCGCCCTCGGCCTGTGGCCGGCGGGCATCCAACAACCACAAGAAGGGGCC GCCCATGTACGTTGA
Upstream 100 bases:
>100_bases TCATCCGCTTCCAGCGCCAGCTCGGCCCGGGCGTCGTGGAGAGCGCCCGGAAAGATCTCGAGCGGATCAAGGCTGCGGAG CAGGCAGGGGGCGGCCGGTG
Downstream 100 bases:
>100_bases GATCCACGAGAGGGCGAAAGCCCCGACTCCCAAGCGCGCCGCGCCGGCCAGCCTGGATGCCGAGCAGCGCCAGGCCGACG AGCTGCTGGAGCGCTACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRRTGFRRAARSNEPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSEAYRRLVAALPCMACGMPGLS QCAHANTGKGMGLKVCDLESFPLCSDRPGTPGCHSLFDQGALLSKAARRAIEPAWIADTQRRIIALGLWPAGIQQPQEGA AHVR
Sequences:
>Translated_164_residues MRRTGFRRAARSNEPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSEAYRRLVAALPCMACGMPGLS QCAHANTGKGMGLKVCDLESFPLCSDRPGTPGCHSLFDQGALLSKAARRAIEPAWIADTQRRIIALGLWPAGIQQPQEGA AHVR >Mature_164_residues MRRTGFRRAARSNEPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSEAYRRLVAALPCMACGMPGLS QCAHANTGKGMGLKVCDLESFPLCSDRPGTPGCHSLFDQGALLSKAARRAIEPAWIADTQRRIIALGLWPAGIQQPQEGA AHVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17596; Mature: 17596
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTGFRRAARSNEPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSE CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCCHHHH AYRRLVAALPCMACGMPGLSQCAHANTGKGMGLKVCDLESFPLCSDRPGTPGCHSLFDQG HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCC ALLSKAARRAIEPAWIADTQRRIIALGLWPAGIQQPQEGAAHVR HHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRTGFRRAARSNEPGLDREQRLADRAARAMAEVRPRASVVMPCGDLAPSVPKAAPVRSE CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCCHHHH AYRRLVAALPCMACGMPGLSQCAHANTGKGMGLKVCDLESFPLCSDRPGTPGCHSLFDQG HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCC ALLSKAARRAIEPAWIADTQRRIIALGLWPAGIQQPQEGAAHVR HHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA