| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610409
Identifier: 120610409
GI number: 120610409
Start: 1891064
End: 1891618
Strand: Direct
Name: 120610409
Synonym: Aave_1726
Alternate gene names: NA
Gene position: 1891064-1891618 (Clockwise)
Preceding gene: 120610408
Following gene: 120610410
Centisome position: 35.33
GC content: 63.06
Gene sequence:
>555_bases ATGAGCATATACCAATTAACCCGTGAAAATATCGTGTATCGCTGGGACGACGGTGTTCGGTCCACCATACCAACGTCTGA TTCACCGATGGCGCCCAATACCAATCCGGACTACATCGCCTACATGGCATGGATTGCGGCTGGCGGCGTGCCCGAGCCTG CAGATCCGGTGCCAGCCACGGAGGTGTGGGAGCGGATCAAGGCCGAGCGCGACCGGCGCAAGTACCTGGGCGTGAAGATC GGGGAGAACTGGTTCCACTCCGATGACGCCAGCCGCATCCAGCAGATGTCCCTGATGCTCATGGGGCAGGCCATGCCGGC CGGAATCCAATGGAAGACGCTCACCTCGGCGCCGCCGCCTGTGTTCGTCACCATGACGCCGGCCCTGGCCCTGTCGATCT TCAACGCCACCGCAGCGAGCGACATGGCGGTGTTCGCGGCTGCCGAAGCACACCGCGTCGCCATGGAAGCTTCTGCCGAT CCTGGCGCCTACGATTTCACCGGCGGCTGGCCGGTGTCCGTGGAAGACGAGCTGCACACCGTGCACAGGGACTGA
Upstream 100 bases:
>100_bases ACAACGTCTTCGCGAATTCTGCGATTTTCGTGAACGGTGCGGGGGAAAGCTATTTGCCCGGTAATTCTGTGGGCTCGAAA TTTACAGGCGGGCAGTACGC
Downstream 100 bases:
>100_bases CCATGCTGCTTGCTTCCTACACCGGCACCCGCCCGGGGCTCCAGGGCCTGGCCAACCGCGCCATCCGTTTTCGCCTGGGC GGCCCGTACAGCCACACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSIYQLTRENIVYRWDDGVRSTIPTSDSPMAPNTNPDYIAYMAWIAAGGVPEPADPVPATEVWERIKAERDRRKYLGVKI GENWFHSDDASRIQQMSLMLMGQAMPAGIQWKTLTSAPPPVFVTMTPALALSIFNATAASDMAVFAAAEAHRVAMEASAD PGAYDFTGGWPVSVEDELHTVHRD
Sequences:
>Translated_184_residues MSIYQLTRENIVYRWDDGVRSTIPTSDSPMAPNTNPDYIAYMAWIAAGGVPEPADPVPATEVWERIKAERDRRKYLGVKI GENWFHSDDASRIQQMSLMLMGQAMPAGIQWKTLTSAPPPVFVTMTPALALSIFNATAASDMAVFAAAEAHRVAMEASAD PGAYDFTGGWPVSVEDELHTVHRD >Mature_183_residues SIYQLTRENIVYRWDDGVRSTIPTSDSPMAPNTNPDYIAYMAWIAAGGVPEPADPVPATEVWERIKAERDRRKYLGVKIG ENWFHSDDASRIQQMSLMLMGQAMPAGIQWKTLTSAPPPVFVTMTPALALSIFNATAASDMAVFAAAEAHRVAMEASADP GAYDFTGGWPVSVEDELHTVHRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20243; Mature: 20112
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYQLTRENIVYRWDDGVRSTIPTSDSPMAPNTNPDYIAYMAWIAAGGVPEPADPVPAT CCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHH EVWERIKAERDRRKYLGVKIGENWFHSDDASRIQQMSLMLMGQAMPAGIQWKTLTSAPPP HHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC VFVTMTPALALSIFNATAASDMAVFAAAEAHRVAMEASADPGAYDFTGGWPVSVEDELHT EEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCHHHHHH VHRD HCCC >Mature Secondary Structure SIYQLTRENIVYRWDDGVRSTIPTSDSPMAPNTNPDYIAYMAWIAAGGVPEPADPVPAT CHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHH EVWERIKAERDRRKYLGVKIGENWFHSDDASRIQQMSLMLMGQAMPAGIQWKTLTSAPPP HHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC VFVTMTPALALSIFNATAASDMAVFAAAEAHRVAMEASADPGAYDFTGGWPVSVEDELHT EEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCHHHHHH VHRD HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA