| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610397
Identifier: 120610397
GI number: 120610397
Start: 1870209
End: 1872188
Strand: Direct
Name: 120610397
Synonym: Aave_1714
Alternate gene names: NA
Gene position: 1870209-1872188 (Clockwise)
Preceding gene: 120610396
Following gene: 120610398
Centisome position: 34.94
GC content: 65.1
Gene sequence:
>1980_bases ATGGCATCTCTCACGTGGATTTCGGGGGCGCGCAGCATCCTGGGCCTTTCCGGAGACGGCTGGTTCAGCTTCCGTGTGCC CGGTGGTGTTGCAGGGGTTGTCGCTGGCCTCAACAATACCGACAGGTCCGCCGATCCCGACGAGATCCTGCACGCTCTGT CGTTCAGCGCAGGTCGGGTGAGGGTGCTCGAATCCGGCATCGCTCGCACGGCATGGACCGGCTACAGCTCCGATGAGACC TTCTACATCGTGAGGGCCGGTGGCAAGGTGTTCTATTGCAGGGGGAACGGCGAAACCCGTGTGGATGGCCTGCCGTTCGC ACTGCCTGGCACCCTCATCTATGCCAGCTCGGCGCCCAGCCTGTACGGCGTGTTCCTGGATGCCTCACTGCTGGGCGGGA CGGACAGCATCGACGACGCGGACCTGCATCGGATCGAGAGTGGCGGCGCCGCATACTTCGCGATGCCTCCCATGCTGATC AGGGCATCCCAGGAGCAGCATGCCGAGGCGCGTGTTTCCTTCGAGCCGATGACGGTGCGGCTGGGCCCGCCAGACGCAGA GCCGGTGCTGCTGCAGTTCCAGCCCATGTCCATCTCGGCGAGCCAGGGCGATTACGCCTCTGCGCTGGTGTCGCTGGAGC CGATGGCGGTCTTTGCTGCCCAGGGAACTTCCGTTGAAGGCACCGAGGTCAGCTTCCCAGCGATGGTGGTCTATGCCGCA GGCGGTGTTGAGGTGCCCGCATCCGTGGACGTCTCGATGCTACCCATGGCGGTCAATGCATCGCAGGATGAGCACAACGA AGCCGTGATCGCTTTTCCTGCGCTGCTTGTGGCCTCAGAAGGCGAAACGTTGGAACTCCCGGCGTTTCGCGTCACGTTGC CGGCGTTCGGTGGGGCGTCCTACTACGCCGACATCGAAGCCATCGGCCTTGGCTCCGACGCGATCTCGGATGCCAGCTAC ATCCTCGTGGAAGAGCGGATTGCCGCGGCGGACGCGGCGGCACCATCGGTGTCCGACGAGGTGATTGTCTCGGATGCTGG TTTCGGAGCGGACTTTCTGGCCCACGGGCTGCAAGTTCTGATGGAGGAGACTGGCGCAGGCGCCGACGAGGCTACCACCC GTGATCCATGGCTGCTCCTGGAGGACGGGGCGGTCGGCTTCGACGCCGCCGCGCTGGCGGTGCGCTCCACCATGGTGCTG GAGGAGCCGGCGCAGGGAGCGGATTCCACGCTGCTGTCCCTCTCGGAGGTTGCCGAAGGGGTCGGCGCCGGGGACGAAGA GGCGTATGCGGCAGAGCCAACCATGGCTTTGGAGGATGTGGGGCTGGGCGAGGATGCCGTTGACGTCACCGCGCAGACGA CAACCGCAGATGCCGAGGACGCTGCAGCATGCTCGGACGAAGTGCAGGTTCACGCCACCTCGCTGGTGCAGGTTTCCGAA GGCGGCGAGGGAGCGGACGAGCTGCTGATGATCGACCGAGGACTGATTGCGTGGGTGATGAACACCGAGACGGGCGGGGT GAGCTGGTACGACGGCTGGGCATTCACCGACATGGCCGTTGTGGATGGCAAGGTGTTCGCCGTGGGACCGGAAGGGCTCG CGGTTGTCGGTGGCAGCCTGGACAGCAAGGAAACCATACCTGCGCGGGTGCGGTACGGCTTCACCGACTTCAGCGGGTTT ACCGACAGCGGGGCGCCCAAGAACAGCGGCACAGGCAAAAAGCGAGTTGTCGGCCTCTGGTACGGCTACGCGGCGGACGG GTTGCTCAATGCGACCGTCGAAACCTACGGCCAGGGCTACGGCCCGTTCACCTACGCAATGCAGCCGCGCTCCGCGGCCC AGCCACGCAACAACAGGGTGGTCCCTGGCAGGGGGCTGAATTCCCGCTACTGGCGGATCGGCATCGCGAATGTGGGCGGG GCTGGCTTCCGGATATCGAGCATCGAGGCCGAGGTGGCCGAAAGCAGAAGGAGATTGTGA
Upstream 100 bases:
>100_bases TTGGGCGTGGTGCACGGGCTGTCTTGCGACATGCGCGGGCAGTGGCAGCTCAATCCTCTGGCAACCACCTTCATCAACTT CCGAACTCTGAAGTAGCGGT
Downstream 100 bases:
>100_bases TGGGAGAAGCAACAGGGGCATTTGCCGAGGCCTACGACGCGGCGAAGCAGATCCGCGACACCGTGCTGGAGAGGCAGGGC AGTGCGATCGAGCGGGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MASLTWISGARSILGLSGDGWFSFRVPGGVAGVVAGLNNTDRSADPDEILHALSFSAGRVRVLESGIARTAWTGYSSDET FYIVRAGGKVFYCRGNGETRVDGLPFALPGTLIYASSAPSLYGVFLDASLLGGTDSIDDADLHRIESGGAAYFAMPPMLI RASQEQHAEARVSFEPMTVRLGPPDAEPVLLQFQPMSISASQGDYASALVSLEPMAVFAAQGTSVEGTEVSFPAMVVYAA GGVEVPASVDVSMLPMAVNASQDEHNEAVIAFPALLVASEGETLELPAFRVTLPAFGGASYYADIEAIGLGSDAISDASY ILVEERIAAADAAAPSVSDEVIVSDAGFGADFLAHGLQVLMEETGAGADEATTRDPWLLLEDGAVGFDAAALAVRSTMVL EEPAQGADSTLLSLSEVAEGVGAGDEEAYAAEPTMALEDVGLGEDAVDVTAQTTTADAEDAAACSDEVQVHATSLVQVSE GGEGADELLMIDRGLIAWVMNTETGGVSWYDGWAFTDMAVVDGKVFAVGPEGLAVVGGSLDSKETIPARVRYGFTDFSGF TDSGAPKNSGTGKKRVVGLWYGYAADGLLNATVETYGQGYGPFTYAMQPRSAAQPRNNRVVPGRGLNSRYWRIGIANVGG AGFRISSIEAEVAESRRRL
Sequences:
>Translated_659_residues MASLTWISGARSILGLSGDGWFSFRVPGGVAGVVAGLNNTDRSADPDEILHALSFSAGRVRVLESGIARTAWTGYSSDET FYIVRAGGKVFYCRGNGETRVDGLPFALPGTLIYASSAPSLYGVFLDASLLGGTDSIDDADLHRIESGGAAYFAMPPMLI RASQEQHAEARVSFEPMTVRLGPPDAEPVLLQFQPMSISASQGDYASALVSLEPMAVFAAQGTSVEGTEVSFPAMVVYAA GGVEVPASVDVSMLPMAVNASQDEHNEAVIAFPALLVASEGETLELPAFRVTLPAFGGASYYADIEAIGLGSDAISDASY ILVEERIAAADAAAPSVSDEVIVSDAGFGADFLAHGLQVLMEETGAGADEATTRDPWLLLEDGAVGFDAAALAVRSTMVL EEPAQGADSTLLSLSEVAEGVGAGDEEAYAAEPTMALEDVGLGEDAVDVTAQTTTADAEDAAACSDEVQVHATSLVQVSE GGEGADELLMIDRGLIAWVMNTETGGVSWYDGWAFTDMAVVDGKVFAVGPEGLAVVGGSLDSKETIPARVRYGFTDFSGF TDSGAPKNSGTGKKRVVGLWYGYAADGLLNATVETYGQGYGPFTYAMQPRSAAQPRNNRVVPGRGLNSRYWRIGIANVGG AGFRISSIEAEVAESRRRL >Mature_658_residues ASLTWISGARSILGLSGDGWFSFRVPGGVAGVVAGLNNTDRSADPDEILHALSFSAGRVRVLESGIARTAWTGYSSDETF YIVRAGGKVFYCRGNGETRVDGLPFALPGTLIYASSAPSLYGVFLDASLLGGTDSIDDADLHRIESGGAAYFAMPPMLIR ASQEQHAEARVSFEPMTVRLGPPDAEPVLLQFQPMSISASQGDYASALVSLEPMAVFAAQGTSVEGTEVSFPAMVVYAAG GVEVPASVDVSMLPMAVNASQDEHNEAVIAFPALLVASEGETLELPAFRVTLPAFGGASYYADIEAIGLGSDAISDASYI LVEERIAAADAAAPSVSDEVIVSDAGFGADFLAHGLQVLMEETGAGADEATTRDPWLLLEDGAVGFDAAALAVRSTMVLE EPAQGADSTLLSLSEVAEGVGAGDEEAYAAEPTMALEDVGLGEDAVDVTAQTTTADAEDAAACSDEVQVHATSLVQVSEG GEGADELLMIDRGLIAWVMNTETGGVSWYDGWAFTDMAVVDGKVFAVGPEGLAVVGGSLDSKETIPARVRYGFTDFSGFT DSGAPKNSGTGKKRVVGLWYGYAADGLLNATVETYGQGYGPFTYAMQPRSAAQPRNNRVVPGRGLNSRYWRIGIANVGGA GFRISSIEAEVAESRRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68589; Mature: 68458
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLTWISGARSILGLSGDGWFSFRVPGGVAGVVAGLNNTDRSADPDEILHALSFSAGRV CCCEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEE RVLESGIARTAWTGYSSDETFYIVRAGGKVFYCRGNGETRVDGLPFALPGTLIYASSAPS EEECCCCCCEEECCCCCCCEEEEEEECCEEEEEECCCCCEECCCCEECCCEEEEECCCCC LYGVFLDASLLGGTDSIDDADLHRIESGGAAYFAMPPMLIRASQEQHAEARVSFEPMTVR EEEEEEEHEECCCCCCCCCCHHHEECCCCEEEEECCCEEEECCCHHCCCEEEEECCEEEE LGPPDAEPVLLQFQPMSISASQGDYASALVSLEPMAVFAAQGTSVEGTEVSFPAMVVYAA ECCCCCCCEEEEEECCEEECCCCCHHHHEEEECCEEEEEECCCCCCCCEECCCEEEEEEC GGVEVPASVDVSMLPMAVNASQDEHNEAVIAFPALLVASEGETLELPAFRVTLPAFGGAS CCEECCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCEEEEEECCCCCCC YYADIEAIGLGSDAISDASYILVEERIAAADAAAPSVSDEVIVSDAGFGADFLAHGLQVL EEEEEEEEECCCHHCCCCEEEEEEHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHH MEETGAGADEATTRDPWLLLEDGAVGFDAAALAVRSTMVLEEPAQGADSTLLSLSEVAEG HHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHH VGAGDEEAYAAEPTMALEDVGLGEDAVDVTAQTTTADAEDAAACSDEVQVHATSLVQVSE CCCCCCCCEECCCCEEHHHCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEEEEEEEC GGEGADELLMIDRGLIAWVMNTETGGVSWYDGWAFTDMAVVDGKVFAVGPEGLAVVGGSL CCCCCCCEEEEECCEEEEEEECCCCCEEEECCCEEEEEEEECCEEEEECCCCEEEECCCC DSKETIPARVRYGFTDFSGFTDSGAPKNSGTGKKRVVGLWYGYAADGLLNATVETYGQGY CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHEEEHHHCCCCC GPFTYAMQPRSAAQPRNNRVVPGRGLNSRYWRIGIANVGGAGFRISSIEAEVAESRRRL CCEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCEEEECHHHHHHHHHCCC >Mature Secondary Structure ASLTWISGARSILGLSGDGWFSFRVPGGVAGVVAGLNNTDRSADPDEILHALSFSAGRV CCEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEE RVLESGIARTAWTGYSSDETFYIVRAGGKVFYCRGNGETRVDGLPFALPGTLIYASSAPS EEECCCCCCEEECCCCCCCEEEEEEECCEEEEEECCCCCEECCCCEECCCEEEEECCCCC LYGVFLDASLLGGTDSIDDADLHRIESGGAAYFAMPPMLIRASQEQHAEARVSFEPMTVR EEEEEEEHEECCCCCCCCCCHHHEECCCCEEEEECCCEEEECCCHHCCCEEEEECCEEEE LGPPDAEPVLLQFQPMSISASQGDYASALVSLEPMAVFAAQGTSVEGTEVSFPAMVVYAA ECCCCCCCEEEEEECCEEECCCCCHHHHEEEECCEEEEEECCCCCCCCEECCCEEEEEEC GGVEVPASVDVSMLPMAVNASQDEHNEAVIAFPALLVASEGETLELPAFRVTLPAFGGAS CCEECCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCEEEEEECCCCCCC YYADIEAIGLGSDAISDASYILVEERIAAADAAAPSVSDEVIVSDAGFGADFLAHGLQVL EEEEEEEEECCCHHCCCCEEEEEEHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHH MEETGAGADEATTRDPWLLLEDGAVGFDAAALAVRSTMVLEEPAQGADSTLLSLSEVAEG HHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHH VGAGDEEAYAAEPTMALEDVGLGEDAVDVTAQTTTADAEDAAACSDEVQVHATSLVQVSE CCCCCCCCEECCCCEEHHHCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEEEEEEEC GGEGADELLMIDRGLIAWVMNTETGGVSWYDGWAFTDMAVVDGKVFAVGPEGLAVVGGSL CCCCCCCEEEEECCEEEEEEECCCCCEEEECCCEEEEEEEECCEEEEECCCCEEEECCCC DSKETIPARVRYGFTDFSGFTDSGAPKNSGTGKKRVVGLWYGYAADGLLNATVETYGQGY CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHEEEHHHCCCCC GPFTYAMQPRSAAQPRNNRVVPGRGLNSRYWRIGIANVGGAGFRISSIEAEVAESRRRL CCEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA