| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610396
Identifier: 120610396
GI number: 120610396
Start: 1869462
End: 1869902
Strand: Direct
Name: 120610396
Synonym: Aave_1713
Alternate gene names: NA
Gene position: 1869462-1869902 (Clockwise)
Preceding gene: 120610395
Following gene: 120610397
Centisome position: 34.93
GC content: 63.72
Gene sequence:
>441_bases ATGGCAAAGTTCTCGACCGGTTTGCGCAATGGCATGCTGGAATCCACTGGTTTCAAGGAAGCGCTGCAAGGCAGCGTGCT CAAGATCTACGGCGGCGCTGTGCCCGATGACGCTGATGCAGCCGTGAGCGGAACGTTGCTCGCGACGCTCACCGACAACG GCGGCTCGGGCGGCCTGAACTTCGGCGCGGCCGCGGGCGGCATCCTCTCGAAGGACACCGCGCAGGTGTGGAAGACCAAC TCCATTCCTACCACCGGCTCCGCAACCTATTTCCGGCTCTCGCCCGCCTCGGACGACGGCTCTGCAAGCACCACCGTGCC TCGGCTGCAGGGAACGATTGCGGCCATCAACGCCGACATGAACGTGTCGAACACGCTGTTCACCGCCGGGCAGCCGTGGA CCCTTAACTATTTCGCGGTGGCTCTGCCGACGCTGCAATGA
Upstream 100 bases:
>100_bases GGCGAAAGCCTGCTGCTCGGCATGGACTCCATCACCACGGACACCAATCGGGCCGTGGCGCTTTTCAACCTCGTTCTTCC CGCTGAATAAGGAGCCTCAC
Downstream 100 bases:
>100_bases GCAAGCTCATCCGCGCAGCGCCTCCACCGCCTGCGCCACCGCCTCCGGCTCAACCTCCGAAGCCGCCCACGCCGACGGTT TACCCGCCGTCGCCGATACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAKFSTGLRNGMLESTGFKEALQGSVLKIYGGAVPDDADAAVSGTLLATLTDNGGSGGLNFGAAAGGILSKDTAQVWKTN SIPTTGSATYFRLSPASDDGSASTTVPRLQGTIAAINADMNVSNTLFTAGQPWTLNYFAVALPTLQ
Sequences:
>Translated_146_residues MAKFSTGLRNGMLESTGFKEALQGSVLKIYGGAVPDDADAAVSGTLLATLTDNGGSGGLNFGAAAGGILSKDTAQVWKTN SIPTTGSATYFRLSPASDDGSASTTVPRLQGTIAAINADMNVSNTLFTAGQPWTLNYFAVALPTLQ >Mature_145_residues AKFSTGLRNGMLESTGFKEALQGSVLKIYGGAVPDDADAAVSGTLLATLTDNGGSGGLNFGAAAGGILSKDTAQVWKTNS IPTTGSATYFRLSPASDDGSASTTVPRLQGTIAAINADMNVSNTLFTAGQPWTLNYFAVALPTLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14838; Mature: 14706
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFSTGLRNGMLESTGFKEALQGSVLKIYGGAVPDDADAAVSGTLLATLTDNGGSGGLN CCCCCCCHHCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCEECCEEEEEEECCCCCCCCC FGAAAGGILSKDTAQVWKTNSIPTTGSATYFRLSPASDDGSASTTVPRLQGTIAAINADM CCCCCCCCCCCCCHHHEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC NVSNTLFTAGQPWTLNYFAVALPTLQ CCCCEEEECCCCEEEEEEEEEECCCC >Mature Secondary Structure AKFSTGLRNGMLESTGFKEALQGSVLKIYGGAVPDDADAAVSGTLLATLTDNGGSGGLN CCCCCCHHCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCEECCEEEEEEECCCCCCCCC FGAAAGGILSKDTAQVWKTNSIPTTGSATYFRLSPASDDGSASTTVPRLQGTIAAINADM CCCCCCCCCCCCCHHHEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC NVSNTLFTAGQPWTLNYFAVALPTLQ CCCCEEEECCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA