| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610387
Identifier: 120610387
GI number: 120610387
Start: 1861231
End: 1861710
Strand: Direct
Name: 120610387
Synonym: Aave_1704
Alternate gene names: NA
Gene position: 1861231-1861710 (Clockwise)
Preceding gene: 120610386
Following gene: 120610388
Centisome position: 34.77
GC content: 68.12
Gene sequence:
>480_bases ATGGCAACCATCCTCAAGAAATTCATCGGCGACCACCAGTTCGGTGGCTTCACGCCGTACGGCAACGTCACGGTGCTGCG CGCCACGCTGCAGACCCTCGCGAACGGCTCCGTCCTCAACGCCAACTCCACCGCGCCCCTGGCCGTGAACGATGTCGTGG CGCTGCAGACCCTGCCCCAGGGCTTCGATCTGCACGACCTGCAGATCATCGTTTCCGACCACCTCGGCGCGGGCGTGACC GGCTCCGTCGGCTTCCTCTACATCGATGGCGTGGACGATGCCGTGGTGCCCCAGGACGCGGCCTACTTCGGCGCCGACTT GGCGCTCAGTGCCGCGGCCCGCCTGCGCACGGGCAGCGCCAAGGCCCCGGTGAAGCTCGCCAAGGAGGCCTACCTGGTGC TCACGATCACGGGCGCCGCCGTGGCGGAAGCCGGCCGCGCCGATTTCATCGTGACGGGCGAGCGGATCGGTCCGAAGTAA
Upstream 100 bases:
>100_bases ACCGCCGTGAAGATCATGAAGCCGCGCTTCTGATGACCCGCGGGGCCGGCGCCGCGAGGTGCCCGGCCCCGGCTCCATTC CCATCACCTTGGAGGCCAAG
Downstream 100 bases:
>100_bases CTGGCCCGCGCAGACCGAAGGCCGGGGCCCTGCGTCCCGGCTTTTCCCCATACCACCCAGGAGCCTGACATGAGCCAGAC CCAGGACGTTGCCGTGACCT
Product: putative phage associated protein
Products: NA
Alternate protein names: Phage Associated Protein; Virion Protein
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MATILKKFIGDHQFGGFTPYGNVTVLRATLQTLANGSVLNANSTAPLAVNDVVALQTLPQGFDLHDLQIIVSDHLGAGVT GSVGFLYIDGVDDAVVPQDAAYFGADLALSAAARLRTGSAKAPVKLAKEAYLVLTITGAAVAEAGRADFIVTGERIGPK
Sequences:
>Translated_159_residues MATILKKFIGDHQFGGFTPYGNVTVLRATLQTLANGSVLNANSTAPLAVNDVVALQTLPQGFDLHDLQIIVSDHLGAGVT GSVGFLYIDGVDDAVVPQDAAYFGADLALSAAARLRTGSAKAPVKLAKEAYLVLTITGAAVAEAGRADFIVTGERIGPK >Mature_158_residues ATILKKFIGDHQFGGFTPYGNVTVLRATLQTLANGSVLNANSTAPLAVNDVVALQTLPQGFDLHDLQIIVSDHLGAGVTG SVGFLYIDGVDDAVVPQDAAYFGADLALSAAARLRTGSAKAPVKLAKEAYLVLTITGAAVAEAGRADFIVTGERIGPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16380; Mature: 16249
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATILKKFIGDHQFGGFTPYGNVTVLRATLQTLANGSVLNANSTAPLAVNDVVALQTLPQ CHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEECCCCCCEEECCEEEEEECCC GFDLHDLQIIVSDHLGAGVTGSVGFLYIDGVDDAVVPQDAAYFGADLALSAAARLRTGSA CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCHHHHHHHHHHHCCCCC KAPVKLAKEAYLVLTITGAAVAEAGRADFIVTGERIGPK CCCCEECCCEEEEEEECCHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure ATILKKFIGDHQFGGFTPYGNVTVLRATLQTLANGSVLNANSTAPLAVNDVVALQTLPQ HHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEECCCCCCEEECCEEEEEECCC GFDLHDLQIIVSDHLGAGVTGSVGFLYIDGVDDAVVPQDAAYFGADLALSAAARLRTGSA CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCHHHHHHHHHHHCCCCC KAPVKLAKEAYLVLTITGAAVAEAGRADFIVTGERIGPK CCCCEECCCEEEEEEECCHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA