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The map label for this gene is 120610381

Identifier: 120610381

GI number: 120610381

Start: 1852876

End: 1853886

Strand: Direct

Name: 120610381

Synonym: Aave_1698

Alternate gene names: NA

Gene position: 1852876-1853886 (Clockwise)

Preceding gene: 120610380

Following gene: 120610382

Centisome position: 34.62

GC content: 68.25

Gene sequence:

>1011_bases
ATGGCCAGAGAACCGGCAGGGAAGAAGCCTGCACCCCGCAAGACCATAGCCCCCAAGCCTGCAGCCCCTCAACGGGCCGC
AGGCAAGGCCGCGCCTGCAGCGCCGGCATCGGCCAAGCCCGCTGTGAAGAAGACACCCACGCCACGGCTGGAGAAGGCCC
CAGCCAAGAAGCAGGCACGCAAGGCCGCCCAGCTTCCGAAGAACGCCCCACCGCCGCAGGCCGAGCGCGCCCAGCTCGGG
CTCACGCCCAAGCAAGAGAAGTTCGTCGACGAGTACCTGGTGGACCTGAACGCCACCCAGGCCGCCATCCGAGCCGGCTA
CAGCCCCGGCACGGCTCGCCAGATGGGCGCGGAGAACCTGTCAAAACCGGACATCCAACTGGCGGTGTCCGAAGCCAGGA
AGCGCCAGCAGGCACGCACCGAGATCACCGCGGACCGCGTGTTGCAGGAGATCGTCAGCGTGGCTCTGGCCGATGCGCGC
GAGCTGGTGGAGGTGCGTACCGGCTGCTGCCGCTGCTGCCACGGCGAAGGGCACAAGTACCAGCGCACCGTGGGCGAGAT
GAACCGGGACCGCGAGGACTGGGTGGAGAAGGGCAAGAACCCTGCCGAGTTCGACGAAGCAGGCGGGATCGGGTTCAACC
CTCTCCTGCAGCCCAACCCCGAGTGCCCGCACTGCGGCGGCGATGGTGCCCCGCGCGTGGTACTGAAGGACACCCGCAAG
ATCAGCGGCGCAGCTGCGGCCCTCTATGCCGGCGCGAAGCAGACCAAGGACGGCATCGAGATCAAGATGCACTCCAAGAT
GGACGCCATCGAGAAGCTGGCGCGGCACCTGGGCGTCTACGAGAAGGACAACCAGCAGAAGGCCGACCCGCTGGCCGCGC
TGCTGGCCCGGATCGCGAACGGCAACAGCAATGGGTTCAAGCCCGTGGCGGATGACCCAGAGGCGCCCCCGCCATCCGGC
ACGAACGGGTTCGAGCCCCGCGAGGATGACGATGGCGGCGCCCCGGTCTAA

Upstream 100 bases:

>100_bases
CCGATCTGACCCCCGATCGCGCCGTGCCAAGACCGGGCGCCGCACGGCAACCCGGCATAGGGTTCGACTCCCCCGCCATG
GCCCGGGACACTTCCTGACC

Downstream 100 bases:

>100_bases
GCGCGCCGCGGCGCCGGCCGAGCCCGGCACGCTGGAAGAGGATGAAGACGCCGTGGCCATCAAGCCCGGGCAGGAGGTAG
ACGCGCAGGTGGGCCACCGC

Product: terminase small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Phage Terminase; Phage-Related Terminase Small Subunit; Bacteriophage Terminase Small Subunit

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MAREPAGKKPAPRKTIAPKPAAPQRAAGKAAPAAPASAKPAVKKTPTPRLEKAPAKKQARKAAQLPKNAPPPQAERAQLG
LTPKQEKFVDEYLVDLNATQAAIRAGYSPGTARQMGAENLSKPDIQLAVSEARKRQQARTEITADRVLQEIVSVALADAR
ELVEVRTGCCRCCHGEGHKYQRTVGEMNRDREDWVEKGKNPAEFDEAGGIGFNPLLQPNPECPHCGGDGAPRVVLKDTRK
ISGAAAALYAGAKQTKDGIEIKMHSKMDAIEKLARHLGVYEKDNQQKADPLAALLARIANGNSNGFKPVADDPEAPPPSG
TNGFEPREDDDGGAPV

Sequences:

>Translated_336_residues
MAREPAGKKPAPRKTIAPKPAAPQRAAGKAAPAAPASAKPAVKKTPTPRLEKAPAKKQARKAAQLPKNAPPPQAERAQLG
LTPKQEKFVDEYLVDLNATQAAIRAGYSPGTARQMGAENLSKPDIQLAVSEARKRQQARTEITADRVLQEIVSVALADAR
ELVEVRTGCCRCCHGEGHKYQRTVGEMNRDREDWVEKGKNPAEFDEAGGIGFNPLLQPNPECPHCGGDGAPRVVLKDTRK
ISGAAAALYAGAKQTKDGIEIKMHSKMDAIEKLARHLGVYEKDNQQKADPLAALLARIANGNSNGFKPVADDPEAPPPSG
TNGFEPREDDDGGAPV
>Mature_335_residues
AREPAGKKPAPRKTIAPKPAAPQRAAGKAAPAAPASAKPAVKKTPTPRLEKAPAKKQARKAAQLPKNAPPPQAERAQLGL
TPKQEKFVDEYLVDLNATQAAIRAGYSPGTARQMGAENLSKPDIQLAVSEARKRQQARTEITADRVLQEIVSVALADARE
LVEVRTGCCRCCHGEGHKYQRTVGEMNRDREDWVEKGKNPAEFDEAGGIGFNPLLQPNPECPHCGGDGAPRVVLKDTRKI
SGAAAALYAGAKQTKDGIEIKMHSKMDAIEKLARHLGVYEKDNQQKADPLAALLARIANGNSNGFKPVADDPEAPPPSGT
NGFEPREDDDGGAPV

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35834; Mature: 35703

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAREPAGKKPAPRKTIAPKPAAPQRAAGKAAPAAPASAKPAVKKTPTPRLEKAPAKKQAR
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
KAAQLPKNAPPPQAERAQLGLTPKQEKFVDEYLVDLNATQAAIRAGYSPGTARQMGAENL
HHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCC
SKPDIQLAVSEARKRQQARTEITADRVLQEIVSVALADARELVEVRTGCCRCCHGEGHKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QRTVGEMNRDREDWVEKGKNPAEFDEAGGIGFNPLLQPNPECPHCGGDGAPRVVLKDTRK
HHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHH
ISGAAAALYAGAKQTKDGIEIKMHSKMDAIEKLARHLGVYEKDNQQKADPLAALLARIAN
HHHHHHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
GNSNGFKPVADDPEAPPPSGTNGFEPREDDDGGAPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AREPAGKKPAPRKTIAPKPAAPQRAAGKAAPAAPASAKPAVKKTPTPRLEKAPAKKQAR
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
KAAQLPKNAPPPQAERAQLGLTPKQEKFVDEYLVDLNATQAAIRAGYSPGTARQMGAENL
HHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCC
SKPDIQLAVSEARKRQQARTEITADRVLQEIVSVALADARELVEVRTGCCRCCHGEGHKY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QRTVGEMNRDREDWVEKGKNPAEFDEAGGIGFNPLLQPNPECPHCGGDGAPRVVLKDTRK
HHHHHHHCCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHH
ISGAAAALYAGAKQTKDGIEIKMHSKMDAIEKLARHLGVYEKDNQQKADPLAALLARIAN
HHHHHHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
GNSNGFKPVADDPEAPPPSGTNGFEPREDDDGGAPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA