| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610337
Identifier: 120610337
GI number: 120610337
Start: 1813416
End: 1814396
Strand: Direct
Name: 120610337
Synonym: Aave_1654
Alternate gene names: NA
Gene position: 1813416-1814396 (Clockwise)
Preceding gene: 120610336
Following gene: 120610338
Centisome position: 33.88
GC content: 70.13
Gene sequence:
>981_bases ATGCGACATTCCCTTCCTCGCCGGCTCGCGCTGGCTGCCCTGGCCGCCTGCGCGGCCCTGCCGCTGGCCGCGGCGGCGCA GGGCAACTACCCCTCCAGGCCGGTCACCCTCGTCGTGCCCACCGCGGCCGGCGGCACCACCGACCTGTCGGCACGCATGC TGGCGCAGGCGCTGGGGCCGGTGCTGGGCCAGTCGGTGGTGGTGGACAACAAGGGCGGCGGCAACGGCAACATCGCGGCC GGTGCCGTGAAGCGCGCGGAGCCGGACGGCTACACGCTGCTCATGCAGTATTCGGGCTACCACGTCATCTCGCCGCTGCT CACGGCGCAGAAGACCTGGGAGATGGGCGACTTCCAGCCCGTGGCGAACGTGCTCTCCGCGCCGCAGATCATCGTGGTGC GCGATGGGCTTCCCGTGAAGACGCTGGGCGAATTGATCGCCCATGCGAAGGCGAACCCCGGCAAGCTCAACTACGCCTCA TCGGGCAATGGCTCGCTGCAGCACGTGACGGGCGCCATGCTGGAGCAGCAGGGCGGCGTGAAGATGGTGCACGTGCCCTA CAAGGGCACCGGCCCGGCGCTGCAGGACCTGCTGGGCGGGCAGGTGGACCTGACCTTCGGCACGGCCCCGCCGTTCATGC CGCACATCCAGTCCGGCAAGCTGCGCGTGCTGGCCGTCACGGGCAGGGAGCGGCTTCCCAGCCTGCCGAACGTGCCCACC ACGGCGGAGGCCGGCTATCCGAAGGTGGATGCCACGTCGTGGTTCGCGTTGTTTGCGCCCGCGGCCACGCCCCCCGCGGT GGTGGACAAACTGGTGGCCGACGTGCGCACGGTGGTGCAGAGCCCCGCGTTCCAGCAGAAGGCGCAGGAGCAGGGCGCCA CGGCGGATTACCAGGGGCCGCAGCAACTGGGCGCGCGCGTGAAATCCGATCTGGCCAATTGGGCACAGGTGGTCAAGGCT GCGAACATCCAGGCGGATTAA
Upstream 100 bases:
>100_bases TGCCGCAATGGGCGCGCGTGGTGAAGGAAACCGGCGCCACCGTGGATTGACGGGCGCGGCGCCACGCAACGAAACACATA ACAACCCCGGAGACATCGAC
Downstream 100 bases:
>100_bases CGGCCTGCCAGCGTGATTTAAGGGTTTTCCCCATTGCGGCGGCGTGCCGCATTTCAGGGCCTCCATGCACCGCATGGGGG CTTTTTTCATGCTGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRHSLPRRLALAALAACAALPLAAAAQGNYPSRPVTLVVPTAAGGTTDLSARMLAQALGPVLGQSVVVDNKGGGNGNIAA GAVKRAEPDGYTLLMQYSGYHVISPLLTAQKTWEMGDFQPVANVLSAPQIIVVRDGLPVKTLGELIAHAKANPGKLNYAS SGNGSLQHVTGAMLEQQGGVKMVHVPYKGTGPALQDLLGGQVDLTFGTAPPFMPHIQSGKLRVLAVTGRERLPSLPNVPT TAEAGYPKVDATSWFALFAPAATPPAVVDKLVADVRTVVQSPAFQQKAQEQGATADYQGPQQLGARVKSDLANWAQVVKA ANIQAD
Sequences:
>Translated_326_residues MRHSLPRRLALAALAACAALPLAAAAQGNYPSRPVTLVVPTAAGGTTDLSARMLAQALGPVLGQSVVVDNKGGGNGNIAA GAVKRAEPDGYTLLMQYSGYHVISPLLTAQKTWEMGDFQPVANVLSAPQIIVVRDGLPVKTLGELIAHAKANPGKLNYAS SGNGSLQHVTGAMLEQQGGVKMVHVPYKGTGPALQDLLGGQVDLTFGTAPPFMPHIQSGKLRVLAVTGRERLPSLPNVPT TAEAGYPKVDATSWFALFAPAATPPAVVDKLVADVRTVVQSPAFQQKAQEQGATADYQGPQQLGARVKSDLANWAQVVKA ANIQAD >Mature_326_residues MRHSLPRRLALAALAACAALPLAAAAQGNYPSRPVTLVVPTAAGGTTDLSARMLAQALGPVLGQSVVVDNKGGGNGNIAA GAVKRAEPDGYTLLMQYSGYHVISPLLTAQKTWEMGDFQPVANVLSAPQIIVVRDGLPVKTLGELIAHAKANPGKLNYAS SGNGSLQHVTGAMLEQQGGVKMVHVPYKGTGPALQDLLGGQVDLTFGTAPPFMPHIQSGKLRVLAVTGRERLPSLPNVPT TAEAGYPKVDATSWFALFAPAATPPAVVDKLVADVRTVVQSPAFQQKAQEQGATADYQGPQQLGARVKSDLANWAQVVKA ANIQAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33824; Mature: 33824
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHSLPRRLALAALAACAALPLAAAAQGNYPSRPVTLVVPTAAGGTTDLSARMLAQALGP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH VLGQSVVVDNKGGGNGNIAAGAVKRAEPDGYTLLMQYSGYHVISPLLTAQKTWEMGDFQP HHCCEEEEECCCCCCCCEECCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHH VANVLSAPQIIVVRDGLPVKTLGELIAHAKANPGKLNYASSGNGSLQHVTGAMLEQQGGV HHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCE KMVHVPYKGTGPALQDLLGGQVDLTFGTAPPFMPHIQSGKLRVLAVTGRERLPSLPNVPT EEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCC TAEAGYPKVDATSWFALFAPAATPPAVVDKLVADVRTVVQSPAFQQKAQEQGATADYQGP CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCH QQLGARVKSDLANWAQVVKAANIQAD HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRHSLPRRLALAALAACAALPLAAAAQGNYPSRPVTLVVPTAAGGTTDLSARMLAQALGP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH VLGQSVVVDNKGGGNGNIAAGAVKRAEPDGYTLLMQYSGYHVISPLLTAQKTWEMGDFQP HHCCEEEEECCCCCCCCEECCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHH VANVLSAPQIIVVRDGLPVKTLGELIAHAKANPGKLNYASSGNGSLQHVTGAMLEQQGGV HHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCE KMVHVPYKGTGPALQDLLGGQVDLTFGTAPPFMPHIQSGKLRVLAVTGRERLPSLPNVPT EEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCC TAEAGYPKVDATSWFALFAPAATPPAVVDKLVADVRTVVQSPAFQQKAQEQGATADYQGP CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCH QQLGARVKSDLANWAQVVKAANIQAD HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]