| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610304
Identifier: 120610304
GI number: 120610304
Start: 1783551
End: 1784102
Strand: Direct
Name: 120610304
Synonym: Aave_1621
Alternate gene names: NA
Gene position: 1783551-1784102 (Clockwise)
Preceding gene: 120610303
Following gene: 120610305
Centisome position: 33.32
GC content: 64.86
Gene sequence:
>552_bases ATGGCTCTGCGCAAGCTCTACATTGGGGAGATGCCCATCACGCCGGAAGACGTCGCCGCCCATCGCCGCGATGACGCGGT GATGGTGGAGACTGCGCTGCTGTCCAACATCATCATCCCCGGCGTGGTCGCTCAGGCGGAGGCCCGCACGGGCGCTGCGA TCCGGCAGGCGCGCTACGTCGAGAGCTGGCAGCCCTCCCGTCCCTCCGGAAGTCCTCTGGATGTCGGCCAGGCCTACCAG GTCGAGGCCGTGGATGCTCTAAGTGCCGATGGCGTGCCGGTTCCCTCTGGCGCGACGGTGTTCCTGCAGCAGGAGATGCG AGAGAGCTACCTGCACTTCGCTTCCGGGCGGCCTTCCGGCATTCTGCAGATCACGTACCTGGCTGGCCTGAATCTCGCCG CGTACCCGTCGGTGCGGACGTGGCTGCTCATGCAGATCGGTACGGTGTATGCGCAACGCGAAACGCTGGTTATGGGTATG TCCGTGGCCGCGTTGCCTCACTCGTTCTTGGACACCATGCTGGCGGACATCGAAGTTCCGCCGCGATTCTGA
Upstream 100 bases:
>100_bases GGAGGCGAGCGACGCAGAGGGCAGTGCGGCGCCAGCCGGACGCGGCGACGGACAGAACGCCAGCGACGGCGGCGCAGGCA ACGACGAACGGCCCTAAGTC
Downstream 100 bases:
>100_bases GGAGCTAGCATGTTGGAAGCCGGCAAGCTGAACCGCCGCATCACCATCCAGCGCCGCGGCGACGAGAAAGGCGGCTGGGG CTCTCCGAAGCCTGGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MALRKLYIGEMPITPEDVAAHRRDDAVMVETALLSNIIIPGVVAQAEARTGAAIRQARYVESWQPSRPSGSPLDVGQAYQ VEAVDALSADGVPVPSGATVFLQQEMRESYLHFASGRPSGILQITYLAGLNLAAYPSVRTWLLMQIGTVYAQRETLVMGM SVAALPHSFLDTMLADIEVPPRF
Sequences:
>Translated_183_residues MALRKLYIGEMPITPEDVAAHRRDDAVMVETALLSNIIIPGVVAQAEARTGAAIRQARYVESWQPSRPSGSPLDVGQAYQ VEAVDALSADGVPVPSGATVFLQQEMRESYLHFASGRPSGILQITYLAGLNLAAYPSVRTWLLMQIGTVYAQRETLVMGM SVAALPHSFLDTMLADIEVPPRF >Mature_182_residues ALRKLYIGEMPITPEDVAAHRRDDAVMVETALLSNIIIPGVVAQAEARTGAAIRQARYVESWQPSRPSGSPLDVGQAYQV EAVDALSADGVPVPSGATVFLQQEMRESYLHFASGRPSGILQITYLAGLNLAAYPSVRTWLLMQIGTVYAQRETLVMGMS VAALPHSFLDTMLADIEVPPRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19855; Mature: 19724
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRKLYIGEMPITPEDVAAHRRDDAVMVETALLSNIIIPGVVAQAEARTGAAIRQARYV CCCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ESWQPSRPSGSPLDVGQAYQVEAVDALSADGVPVPSGATVFLQQEMRESYLHFASGRPSG HHCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC ILQITYLAGLNLAAYPSVRTWLLMQIGTVYAQRETLVMGMSVAALPHSFLDTMLADIEVP EEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCCC PRF CCC >Mature Secondary Structure ALRKLYIGEMPITPEDVAAHRRDDAVMVETALLSNIIIPGVVAQAEARTGAAIRQARYV CCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ESWQPSRPSGSPLDVGQAYQVEAVDALSADGVPVPSGATVFLQQEMRESYLHFASGRPSG HHCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC ILQITYLAGLNLAAYPSVRTWLLMQIGTVYAQRETLVMGMSVAALPHSFLDTMLADIEVP EEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCCC PRF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA