| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610170
Identifier: 120610170
GI number: 120610170
Start: 1643375
End: 1644013
Strand: Direct
Name: 120610170
Synonym: Aave_1483
Alternate gene names: NA
Gene position: 1643375-1644013 (Clockwise)
Preceding gene: 120610169
Following gene: 120610171
Centisome position: 30.7
GC content: 65.57
Gene sequence:
>639_bases ATGTCAAGTTACAACGCTCCTTTTGAAATCCATGTCCACGGCCAGGTGCAGATGCGTGCCGACACCACGTTCGAGCAGCT GCAGGACGCGCTCAAGCCGCTCTGGAAGTACGCGGGCGCCCGTTCGCTGGCCGACGGTGCGGCGAGCGCGTACGAGGAAG AGCCGGGCATCGAGTTCGATGCCAAGGAGCACGTGCTGAACATCTGCTGGACGGTGCATGGCGACGAGGATTTCCGCCAG TCGCTGGACGAGATGTGCATGAGCCTGAACGAACTTTCGGAGCAGGGCGCGGCCATCGAGGTGACGTTCTACGACACGGA GTTCGACGAGGACGAGGAAGACGACGGCACCGAGGCGCGCGATGATTTCGTCATGCTCTTCGTGGGCCCGACGCCCGCGG CCATCATGCAGGTGCAGCGCGATCTGCTGGTGCAGGACGTGGTGCACCTGATGGAGCGCCATTTCGACGGCGCCGAACTG GGCGGCGTGGTATCGGAGATCGACAAGCTGTTCTCGCAGCGCTTCGATGCCCTGGTGAATTCGCTGGAGATCGGCAAGCC CCCGCGCGGCACGGGGGGCGGCCCCGGTTCCGGCGGCCACGGCGGCGGCGGTGGCCGGAGGCCCCGCCACCTGCATTGA
Upstream 100 bases:
>100_bases GATGGTGAAATTGGTAGACACTGCGGACTTAAAATCCGCCGCTTCCTGCGAAGGGGCGTGCCGGTTCGATCCCGGCTCGG GGCACCACTACGATTCGATC
Downstream 100 bases:
>100_bases GCGTCCGGCCGTCCGGCGCCGATCCGTTGCTGCCCTACCTGCAAGGCTATCCCGAGCCGCTGCGCGCGCAGGTCGCAGCC CTCGCGGACGGCGACGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSSYNAPFEIHVHGQVQMRADTTFEQLQDALKPLWKYAGARSLADGAASAYEEEPGIEFDAKEHVLNICWTVHGDEDFRQ SLDEMCMSLNELSEQGAAIEVTFYDTEFDEDEEDDGTEARDDFVMLFVGPTPAAIMQVQRDLLVQDVVHLMERHFDGAEL GGVVSEIDKLFSQRFDALVNSLEIGKPPRGTGGGPGSGGHGGGGGRRPRHLH
Sequences:
>Translated_212_residues MSSYNAPFEIHVHGQVQMRADTTFEQLQDALKPLWKYAGARSLADGAASAYEEEPGIEFDAKEHVLNICWTVHGDEDFRQ SLDEMCMSLNELSEQGAAIEVTFYDTEFDEDEEDDGTEARDDFVMLFVGPTPAAIMQVQRDLLVQDVVHLMERHFDGAEL GGVVSEIDKLFSQRFDALVNSLEIGKPPRGTGGGPGSGGHGGGGGRRPRHLH >Mature_211_residues SSYNAPFEIHVHGQVQMRADTTFEQLQDALKPLWKYAGARSLADGAASAYEEEPGIEFDAKEHVLNICWTVHGDEDFRQS LDEMCMSLNELSEQGAAIEVTFYDTEFDEDEEDDGTEARDDFVMLFVGPTPAAIMQVQRDLLVQDVVHLMERHFDGAELG GVVSEIDKLFSQRFDALVNSLEIGKPPRGTGGGPGSGGHGGGGGRRPRHLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23338; Mature: 23207
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYNAPFEIHVHGQVQMRADTTFEQLQDALKPLWKYAGARSLADGAASAYEEEPGIEFD CCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC AKEHVLNICWTVHGDEDFRQSLDEMCMSLNELSEQGAAIEVTFYDTEFDEDEEDDGTEAR HHHHHEEHHEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC DDFVMLFVGPTPAAIMQVQRDLLVQDVVHLMERHFDGAELGGVVSEIDKLFSQRFDALVN CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SLEIGKPPRGTGGGPGSGGHGGGGGRRPRHLH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSYNAPFEIHVHGQVQMRADTTFEQLQDALKPLWKYAGARSLADGAASAYEEEPGIEFD CCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC AKEHVLNICWTVHGDEDFRQSLDEMCMSLNELSEQGAAIEVTFYDTEFDEDEEDDGTEAR HHHHHEEHHEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC DDFVMLFVGPTPAAIMQVQRDLLVQDVVHLMERHFDGAELGGVVSEIDKLFSQRFDALVN CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SLEIGKPPRGTGGGPGSGGHGGGGGRRPRHLH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA