| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609477
Identifier: 120609477
GI number: 120609477
Start: 841122
End: 842444
Strand: Reverse
Name: 120609477
Synonym: Aave_0783
Alternate gene names: NA
Gene position: 842444-841122 (Counterclockwise)
Preceding gene: 120609478
Following gene: 120609476
Centisome position: 15.74
GC content: 67.27
Gene sequence:
>1323_bases ATGCAACCCAGGAAGATCGCATCGATCGCCGCCGTCCTCGCGGCCGGCCTCTCCGCGCTCGCCACCGCGCCGCTCGCGCA GGCGCAGGCCGCGGGCGAGCAGTTCGTGCCGCTGCTCGTCTACCGCACCGGGCAGTTCGCGCCGCTCGGCATTCCCTGGG CGGACGGCAAGCAGGACTACCTCAAGCTGGTGAACACGCGCGACGGCGGCGTGAACGGCGTCAGGCTCTCGTTCGAGGAA TGCGAGACGGCCTACGACGCGGCCAAGGGCGTGGAGTGCTACGAACGCCTCAAGGGCAAGGGCGGCGGCGCCTCCGGCTT CGACACGCAGTCCACCGGCATCACCTTCGCGGTGACCGACAAGGCCTTCGTGGACAAGATCCCGGTGGAGACCCCGGGCT ACGGCCTCTCGCAGTCGGCCGACGGCACGGTGTTCGAGTGGAACTTCCCGCTGCTGGGCACCTACTGGACCGCCGCCGAC GTGATGCTGCAGGACATCGCCAAGAAGGAAAAGGGCAGCCTCAAGGGCAAGAAGATCGCGCTGGTCTATCACGACAGCCC GTACGGCAAGGAGCCGATCCCGCTGCTGCAAAAGCGCGCCGAGGCCGACGGCTTCACGCTCTCCACCTTCCCCGTCACGC CGCCCGGCGTGGAGCAGAAATCCACCTGGCTGCAGATCCGCCAGCAGCGGCCCGACTACGTGCTCTTCTGGTCGGCCGGC GTGATGACGCCCGCCGGCATCCGCGAGGCGCAGGCCAGCGGCTACCCGCGCGAGAAGATCTACGGCATCTGGTGGGCCGG CTCCGACCACGACGTGAAGGACATCGGCGCGGGCGCCAAGGGCTACAACGCCATCACCATCCACAACAGCGCCGCCAGGG ACAAGGTGCACGACGACCTGAAGAAGTTCGTCTATGACAAGGGCCAGGGCACGGGTGCCCCCACGGGCGTGGGCACGCTG GCGCACACGCGCGGGATGATGATCTCGATGCTGCAGGTGGAGGCGATCCGCGCCGCGCAGGAGAAGTACGGCAAGGGCAA GGTGCTCACGCCCGAGCAGGTGCGCTGGGGCTTCGAGAACCTGGACCTCACGGCCGACAAGCTCAAGGCCCTGGGCTTCG GCGAGATCATGCGCCCGGTGAAGACCTCCTGCCAGAACCACATGGGCACCGACTGGGCGCGCATCGTGCAGTGGGACGGC GGCAAGTGGAACCTCGCTTCGGACTGGTACCAGGCCGACAAGACGCACATCGATCCGCTGGTGAAGGAGTACGCGGCGAA GTACGCGAAGGACAAGAACATCAAGCCGAGGAACTGTAGCTAA
Upstream 100 bases:
>100_bases AAGCTGCGCATCTGGCCGTTCCCGCACTGACCGGCGCCACCGCCCCCAACGCTTTCCCCAACGCACCACCCGAGTGCCCA CCATCCCAAGGAGACATGCC
Downstream 100 bases:
>100_bases CACCCCCCTGAGCGGCTGCGCCGCTCCGCGCTGCCGCCAGAGGCGATTGCCCTTCGTGCACGTCCAAGCCTGCGCAGGCA GGCTCGGAGCCGCGGCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MQPRKIASIAAVLAAGLSALATAPLAQAQAAGEQFVPLLVYRTGQFAPLGIPWADGKQDYLKLVNTRDGGVNGVRLSFEE CETAYDAAKGVECYERLKGKGGGASGFDTQSTGITFAVTDKAFVDKIPVETPGYGLSQSADGTVFEWNFPLLGTYWTAAD VMLQDIAKKEKGSLKGKKIALVYHDSPYGKEPIPLLQKRAEADGFTLSTFPVTPPGVEQKSTWLQIRQQRPDYVLFWSAG VMTPAGIREAQASGYPREKIYGIWWAGSDHDVKDIGAGAKGYNAITIHNSAARDKVHDDLKKFVYDKGQGTGAPTGVGTL AHTRGMMISMLQVEAIRAAQEKYGKGKVLTPEQVRWGFENLDLTADKLKALGFGEIMRPVKTSCQNHMGTDWARIVQWDG GKWNLASDWYQADKTHIDPLVKEYAAKYAKDKNIKPRNCS
Sequences:
>Translated_440_residues MQPRKIASIAAVLAAGLSALATAPLAQAQAAGEQFVPLLVYRTGQFAPLGIPWADGKQDYLKLVNTRDGGVNGVRLSFEE CETAYDAAKGVECYERLKGKGGGASGFDTQSTGITFAVTDKAFVDKIPVETPGYGLSQSADGTVFEWNFPLLGTYWTAAD VMLQDIAKKEKGSLKGKKIALVYHDSPYGKEPIPLLQKRAEADGFTLSTFPVTPPGVEQKSTWLQIRQQRPDYVLFWSAG VMTPAGIREAQASGYPREKIYGIWWAGSDHDVKDIGAGAKGYNAITIHNSAARDKVHDDLKKFVYDKGQGTGAPTGVGTL AHTRGMMISMLQVEAIRAAQEKYGKGKVLTPEQVRWGFENLDLTADKLKALGFGEIMRPVKTSCQNHMGTDWARIVQWDG GKWNLASDWYQADKTHIDPLVKEYAAKYAKDKNIKPRNCS >Mature_440_residues MQPRKIASIAAVLAAGLSALATAPLAQAQAAGEQFVPLLVYRTGQFAPLGIPWADGKQDYLKLVNTRDGGVNGVRLSFEE CETAYDAAKGVECYERLKGKGGGASGFDTQSTGITFAVTDKAFVDKIPVETPGYGLSQSADGTVFEWNFPLLGTYWTAAD VMLQDIAKKEKGSLKGKKIALVYHDSPYGKEPIPLLQKRAEADGFTLSTFPVTPPGVEQKSTWLQIRQQRPDYVLFWSAG VMTPAGIREAQASGYPREKIYGIWWAGSDHDVKDIGAGAKGYNAITIHNSAARDKVHDDLKKFVYDKGQGTGAPTGVGTL AHTRGMMISMLQVEAIRAAQEKYGKGKVLTPEQVRWGFENLDLTADKLKALGFGEIMRPVKTSCQNHMGTDWARIVQWDG GKWNLASDWYQADKTHIDPLVKEYAAKYAKDKNIKPRNCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48045; Mature: 48045
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPRKIASIAAVLAAGLSALATAPLAQAQAAGEQFVPLLVYRTGQFAPLGIPWADGKQDY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH LKLVNTRDGGVNGVRLSFEECETAYDAAKGVECYERLKGKGGGASGFDTQSTGITFAVTD HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC KAFVDKIPVETPGYGLSQSADGTVFEWNFPLLGTYWTAADVMLQDIAKKEKGSLKGKKIA HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LVYHDSPYGKEPIPLLQKRAEADGFTLSTFPVTPPGVEQKSTWLQIRQQRPDYVLFWSAG EEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECC VMTPAGIREAQASGYPREKIYGIWWAGSDHDVKDIGAGAKGYNAITIHNSAARDKVHDDL CCCCCCCHHHHHCCCCHHHEEEEEECCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHH KKFVYDKGQGTGAPTGVGTLAHTRGMMISMLQVEAIRAAQEKYGKGKVLTPEQVRWGFEN HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC LDLTADKLKALGFGEIMRPVKTSCQNHMGTDWARIVQWDGGKWNLASDWYQADKTHIDPL CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHH VKEYAAKYAKDKNIKPRNCS HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQPRKIASIAAVLAAGLSALATAPLAQAQAAGEQFVPLLVYRTGQFAPLGIPWADGKQDY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHH LKLVNTRDGGVNGVRLSFEECETAYDAAKGVECYERLKGKGGGASGFDTQSTGITFAVTD HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC KAFVDKIPVETPGYGLSQSADGTVFEWNFPLLGTYWTAADVMLQDIAKKEKGSLKGKKIA HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LVYHDSPYGKEPIPLLQKRAEADGFTLSTFPVTPPGVEQKSTWLQIRQQRPDYVLFWSAG EEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECC VMTPAGIREAQASGYPREKIYGIWWAGSDHDVKDIGAGAKGYNAITIHNSAARDKVHDDL CCCCCCCHHHHHCCCCHHHEEEEEECCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHH KKFVYDKGQGTGAPTGVGTLAHTRGMMISMLQVEAIRAAQEKYGKGKVLTPEQVRWGFEN HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC LDLTADKLKALGFGEIMRPVKTSCQNHMGTDWARIVQWDGGKWNLASDWYQADKTHIDPL CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHH VKEYAAKYAKDKNIKPRNCS HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA