| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609456
Identifier: 120609456
GI number: 120609456
Start: 816893
End: 818575
Strand: Direct
Name: 120609456
Synonym: Aave_0762
Alternate gene names: NA
Gene position: 816893-818575 (Clockwise)
Preceding gene: 120609455
Following gene: 120609457
Centisome position: 15.26
GC content: 73.92
Gene sequence:
>1683_bases GTGGCTGATCACAACAACCATCCCCCGACCAAGGCACCCGGCAGCTTCGCGCCGCTCGCCATTCCCGTCTTCGCCGTGCT GTGGGCCGCCACGGTGCTGGGCAACATCGGCAGCTTCATGCGCGACGTGGCCAGCGCCTGGATGGTGACGGAGCTGTCCT CCAGCCCCGCGGCCGTGGCGCTGATCCAGACGGCGGCCACGCTGCCCGTCTTCCTGCTGGCGATTCCCGCGGGCGTGCTG TCGGACATCCTGGACCGCCGCCGCTTCCTGATCGGCGTGCAGGTGCTGCTGGGCGCCGTCAGCGGCACGCTGCTGGTGCT GGCCCACACGCAGGCGCTGACGGTGGAGTGGCTGGTGGCGCTCACCTTCGTGGGCGGCATCGGCGCCGCGCTGATGGGCC CGACCTGGCAGTCCATCGTGCCCGAGCTGGTGCCGCGCAGCGAGCTCAAGAGCGCCGTGGCGCTGAATTCGCTGGGCATC AACATCGCCCGCGCCATCGGGCCGGCCGCCGGCGGCCTGCTGCTGGCGAGCTTCGGCGCCGCGGCCGCCTACGGGCTCGA CGTGCTGAGCTATGTGTTCGTGATCGCCGCGCTGCTGTGGTGGAAGCGCCCGCAGGCCGAGGCCTCGGCGCTGAACGAGC AGTTCTTCGGCGCCTTCCGGGCCGGCGTGCGCTATGCCCGCGCCAGCCGCGAACTGCACGTGGTGCTGCTGCGCGCGGCG GTGTTCTTCCTGTTCGCCAGTTCGGTCTGGGCGCTGCTGCCGCTGGTGGCGCGCCGCATGCTGGGCGGCACGGCCGGCTT CTACGGCGTGATGCTGGGCGCCGTGGGCGCGGGCGCCATCCTGGGCGCGGTGCTGCTGCCGCGGCTGCGCAGGCGCCTGG ACACCGACGGGCTGGTGCTGCTGGCCTCGGCCGTCACGGCGGTGGTGATGGGCGTGCTGGCCCTGGCGCCACCGCAGTGG GCCGCCGTGGCGCTGATGCTGGCGCTGGGCCTGGGCTGGATCATCGCGCTGACCACGCTCAACGGCGTGGCCCAGGCGGT GCTGCCCAACTGGGTGCGCGGCCGCGGGCTGGCCATCTACCTGATGGTGTTCAACGGCGCCATGGCGCTGGGCAGCCTGG GCTGGGGCCTGGTGGCCGGCCAGCTGGGCCTGCCGGCCACGCTGCTGGCCGGGGCGGGCGGGCTGGTGGCCGTGTCGCTG GTCTTCCACCGCGTCAAGCTGCCCACGGGCGAAGCCGACCTGCAGCCGTCCAACCACTGGCCCGAGCCGCTGCTGGCCGA GCCCGTGGCGCACGACCGCGGCCCGGTGATGGTGCAGGTCGAGTACCGGGTGCGGCGGCACGACCTGCCTGCCTTCCTGC AGGCCATGCGGCACGTGGCCCGCGAGCGCCGCCGCGACGGTGCCTATGCCTGGGGCGTGGCCGAGCACACGGGGGAGCCG GGGCGGGTGATCGAATGGTTCCTGGTCGAGTCCTGGGCGGAGCACCTGCGGCAGCACCGGCGCGTCTCGCGTGCCGATGC CGACCAGCAGGCCGAGGCACGGCGCTTCCACATCGGCCCGGAGGCCCCGGTGGTGCACCACTTCCTGGCGCTGGATCCGC GCGATCCCGCAGCCTCCGTGCCGCGGGACCCGGACCCGGACGGGCATGGCCACGGCCATGCCGGCAGCGGCGGGGTGGAC TGA
Upstream 100 bases:
>100_bases GCGCCGCCCGAGCGGCAGCGCAGCGCCAACGCATTCTTCGAACATTGGGGCCTGGTGGGCGGCATGCTGCTCGTCGCCTG GCACGACCTGGGAGCTTATC
Downstream 100 bases:
>100_bases TCCGTCTTGGGCAGGGGCTGGACCTTTTCTTGCTTGGGGTGACCCGGCCGTCCGGAGGGGCTGCGGATGTGTCGTCATTT GGTAACGACATAATCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Transporter; MFS Permease; MFS Family Transporter; Integral Membrane Efflux Protein; MFS Transporter; Facilitator Superfamily Permease; Facilitator Superfamily; Transport Transmembrane Protein; Facilitator Transpoter; Mfs Transporter; Macrolide-Efflux Protein; Transporter Facilitator Family; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transmembrane Transporter; Facilitator Superfamily Transporter; Dioxygenase; Transmembrane Efflux Protein; MFS Family Diterpenoid Transporter; Multidrug ABC Transporter; ABC Transporter Permease Protein; Permeases Of Facilitator Superfamily; MFS Superfamily Transporter
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MADHNNHPPTKAPGSFAPLAIPVFAVLWAATVLGNIGSFMRDVASAWMVTELSSSPAAVALIQTAATLPVFLLAIPAGVL SDILDRRRFLIGVQVLLGAVSGTLLVLAHTQALTVEWLVALTFVGGIGAALMGPTWQSIVPELVPRSELKSAVALNSLGI NIARAIGPAAGGLLLASFGAAAAYGLDVLSYVFVIAALLWWKRPQAEASALNEQFFGAFRAGVRYARASRELHVVLLRAA VFFLFASSVWALLPLVARRMLGGTAGFYGVMLGAVGAGAILGAVLLPRLRRRLDTDGLVLLASAVTAVVMGVLALAPPQW AAVALMLALGLGWIIALTTLNGVAQAVLPNWVRGRGLAIYLMVFNGAMALGSLGWGLVAGQLGLPATLLAGAGGLVAVSL VFHRVKLPTGEADLQPSNHWPEPLLAEPVAHDRGPVMVQVEYRVRRHDLPAFLQAMRHVARERRRDGAYAWGVAEHTGEP GRVIEWFLVESWAEHLRQHRRVSRADADQQAEARRFHIGPEAPVVHHFLALDPRDPAASVPRDPDPDGHGHGHAGSGGVD
Sequences:
>Translated_560_residues MADHNNHPPTKAPGSFAPLAIPVFAVLWAATVLGNIGSFMRDVASAWMVTELSSSPAAVALIQTAATLPVFLLAIPAGVL SDILDRRRFLIGVQVLLGAVSGTLLVLAHTQALTVEWLVALTFVGGIGAALMGPTWQSIVPELVPRSELKSAVALNSLGI NIARAIGPAAGGLLLASFGAAAAYGLDVLSYVFVIAALLWWKRPQAEASALNEQFFGAFRAGVRYARASRELHVVLLRAA VFFLFASSVWALLPLVARRMLGGTAGFYGVMLGAVGAGAILGAVLLPRLRRRLDTDGLVLLASAVTAVVMGVLALAPPQW AAVALMLALGLGWIIALTTLNGVAQAVLPNWVRGRGLAIYLMVFNGAMALGSLGWGLVAGQLGLPATLLAGAGGLVAVSL VFHRVKLPTGEADLQPSNHWPEPLLAEPVAHDRGPVMVQVEYRVRRHDLPAFLQAMRHVARERRRDGAYAWGVAEHTGEP GRVIEWFLVESWAEHLRQHRRVSRADADQQAEARRFHIGPEAPVVHHFLALDPRDPAASVPRDPDPDGHGHGHAGSGGVD >Mature_559_residues ADHNNHPPTKAPGSFAPLAIPVFAVLWAATVLGNIGSFMRDVASAWMVTELSSSPAAVALIQTAATLPVFLLAIPAGVLS DILDRRRFLIGVQVLLGAVSGTLLVLAHTQALTVEWLVALTFVGGIGAALMGPTWQSIVPELVPRSELKSAVALNSLGIN IARAIGPAAGGLLLASFGAAAAYGLDVLSYVFVIAALLWWKRPQAEASALNEQFFGAFRAGVRYARASRELHVVLLRAAV FFLFASSVWALLPLVARRMLGGTAGFYGVMLGAVGAGAILGAVLLPRLRRRLDTDGLVLLASAVTAVVMGVLALAPPQWA AVALMLALGLGWIIALTTLNGVAQAVLPNWVRGRGLAIYLMVFNGAMALGSLGWGLVAGQLGLPATLLAGAGGLVAVSLV FHRVKLPTGEADLQPSNHWPEPLLAEPVAHDRGPVMVQVEYRVRRHDLPAFLQAMRHVARERRRDGAYAWGVAEHTGEPG RVIEWFLVESWAEHLRQHRRVSRADADQQAEARRFHIGPEAPVVHHFLALDPRDPAASVPRDPDPDGHGHGHAGSGGVD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59269; Mature: 59138
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHNNHPPTKAPGSFAPLAIPVFAVLWAATVLGNIGSFMRDVASAWMVTELSSSPAAVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LIQTAATLPVFLLAIPAGVLSDILDRRRFLIGVQVLLGAVSGTLLVLAHTQALTVEWLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH LTFVGGIGAALMGPTWQSIVPELVPRSELKSAVALNSLGINIARAIGPAAGGLLLASFGA HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH AAAYGLDVLSYVFVIAALLWWKRPQAEASALNEQFFGAFRAGVRYARASRELHVVLLRAA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VFFLFASSVWALLPLVARRMLGGTAGFYGVMLGAVGAGAILGAVLLPRLRRRLDTDGLVL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LASAVTAVVMGVLALAPPQWAAVALMLALGLGWIIALTTLNGVAQAVLPNWVRGRGLAIY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LMVFNGAMALGSLGWGLVAGQLGLPATLLAGAGGLVAVSLVFHRVKLPTGEADLQPSNHW EEHHHCHHHHHHCCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC PEPLLAEPVAHDRGPVMVQVEYRVRRHDLPAFLQAMRHVARERRRDGAYAWGVAEHTGEP CCCHHCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCC GRVIEWFLVESWAEHLRQHRRVSRADADQQAEARRFHIGPEAPVVHHFLALDPRDPAASV CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC PRDPDPDGHGHGHAGSGGVD CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADHNNHPPTKAPGSFAPLAIPVFAVLWAATVLGNIGSFMRDVASAWMVTELSSSPAAVA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LIQTAATLPVFLLAIPAGVLSDILDRRRFLIGVQVLLGAVSGTLLVLAHTQALTVEWLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH LTFVGGIGAALMGPTWQSIVPELVPRSELKSAVALNSLGINIARAIGPAAGGLLLASFGA HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH AAAYGLDVLSYVFVIAALLWWKRPQAEASALNEQFFGAFRAGVRYARASRELHVVLLRAA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VFFLFASSVWALLPLVARRMLGGTAGFYGVMLGAVGAGAILGAVLLPRLRRRLDTDGLVL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LASAVTAVVMGVLALAPPQWAAVALMLALGLGWIIALTTLNGVAQAVLPNWVRGRGLAIY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LMVFNGAMALGSLGWGLVAGQLGLPATLLAGAGGLVAVSLVFHRVKLPTGEADLQPSNHW EEHHHCHHHHHHCCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC PEPLLAEPVAHDRGPVMVQVEYRVRRHDLPAFLQAMRHVARERRRDGAYAWGVAEHTGEP CCCHHCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCC GRVIEWFLVESWAEHLRQHRRVSRADADQQAEARRFHIGPEAPVVHHFLALDPRDPAASV CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC PRDPDPDGHGHGHAGSGGVD CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA