| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yhhW [C]
Identifier: 120609452
GI number: 120609452
Start: 813082
End: 813807
Strand: Direct
Name: yhhW [C]
Synonym: Aave_0758
Alternate gene names: 120609452
Gene position: 813082-813807 (Clockwise)
Preceding gene: 120609450
Following gene: 120609453
Centisome position: 15.19
GC content: 66.39
Gene sequence:
>726_bases ATGATCGACATCCGCAAAGCCCAACACCGCGGCACTGCCAACCATGGCTGGCTGCACTCCCGCCACACGTTCTCGTTCGG CCACTACCGCGATGCGAACCAGCAGGGTTTCTCCGACCTGCTCGTGATCAACGATGACCGCGTGGCGCCTTCGAAGGGCT TCGGCACCCATGGCCACCGCGACATGGAAATCTTCTCCTATGTGCTCGACGGCGCGCTGCAGCACAAGGATTCGATGGGC ACGGGCTCGGTGATCCGCCCCGGCGACGTGCAGATGATGAGCGCCGGCAGCGGCGTGCAGCACAGCGAGTTCAACCATTC GCCCGAAGAGCCCGTGCACTTCCTGCAGATCTGGATCGTGCCGAACAAGGTCGGTGTCCAGCCGCGCTACCAGCAGGTGC ACTTCACCGAAGCCGACAAGCGCGGCCGGCTGCGCCAGATCATCTCGCCGGAGGGCACGAACGGATCGCTGGCCGTGCAC CAGGACGCCCGGGTCTATGCCGGCCTGTTCGACGGGGACGAGTCTGCCGACCTGGCCGTGGGCGCCAACCGCAACGTCTA TGTGCATGTGGCCCGCGGCAGCGTCGAGGTGAACGGCGAGCGGCTGGACGAAGGCGACGGCGCCCGCATCCGCAACGCCG GCGACCTGCATTTCGCCAAGGGCGAGGACGCCGAGGTGCTGGTGTTCGACCTGCGGCCCAACGAGCTGCCCACGATGCCC CATTGA
Upstream 100 bases:
>100_bases ATACTTTCTTCACCGCAGCACTGAAAGCCCAGGGAAAAACCTGGGGAAGGCTCTCCGGGGCGCAGTGTGAATTCCATCGA ATGAAGAAAGGACCGAAACC
Downstream 100 bases:
>100_bases CGGGCACGTCAGGTTCTTCCGTTCTTTCGTTGATTCCGTCATCCACATACGTTCCAGGAGCTTCCCATGCAAAACGCCAA CGCTTCCACCGCCCGTCCCG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIDIRKAQHRGTANHGWLHSRHTFSFGHYRDANQQGFSDLLVINDDRVAPSKGFGTHGHRDMEIFSYVLDGALQHKDSMG TGSVIRPGDVQMMSAGSGVQHSEFNHSPEEPVHFLQIWIVPNKVGVQPRYQQVHFTEADKRGRLRQIISPEGTNGSLAVH QDARVYAGLFDGDESADLAVGANRNVYVHVARGSVEVNGERLDEGDGARIRNAGDLHFAKGEDAEVLVFDLRPNELPTMP H
Sequences:
>Translated_241_residues MIDIRKAQHRGTANHGWLHSRHTFSFGHYRDANQQGFSDLLVINDDRVAPSKGFGTHGHRDMEIFSYVLDGALQHKDSMG TGSVIRPGDVQMMSAGSGVQHSEFNHSPEEPVHFLQIWIVPNKVGVQPRYQQVHFTEADKRGRLRQIISPEGTNGSLAVH QDARVYAGLFDGDESADLAVGANRNVYVHVARGSVEVNGERLDEGDGARIRNAGDLHFAKGEDAEVLVFDLRPNELPTMP H >Mature_241_residues MIDIRKAQHRGTANHGWLHSRHTFSFGHYRDANQQGFSDLLVINDDRVAPSKGFGTHGHRDMEIFSYVLDGALQHKDSMG TGSVIRPGDVQMMSAGSGVQHSEFNHSPEEPVHFLQIWIVPNKVGVQPRYQQVHFTEADKRGRLRQIISPEGTNGSLAVH QDARVYAGLFDGDESADLAVGANRNVYVHVARGSVEVNGERLDEGDGARIRNAGDLHFAKGEDAEVLVFDLRPNELPTMP H
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=94, Percent_Identity=39.3617021276596, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4505823, Length=94, Percent_Identity=39.3617021276596, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=45.4935622317597, Blast_Score=217, Evalue=6e-58, Organism=Escherichia coli, GI1789493, Length=236, Percent_Identity=30.9322033898305, Blast_Score=119, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 26704; Mature: 26704
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDIRKAQHRGTANHGWLHSRHTFSFGHYRDANQQGFSDLLVINDDRVAPSKGFGTHGHR CCCCCCHHCCCCCCCCEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC DMEIFSYVLDGALQHKDSMGTGSVIRPGDVQMMSAGSGVQHSEFNHSPEEPVHFLQIWIV HHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE PNKVGVQPRYQQVHFTEADKRGRLRQIISPEGTNGSLAVHQDARVYAGLFDGDESADLAV CCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEE GANRNVYVHVARGSVEVNGERLDEGDGARIRNAGDLHFAKGEDAEVLVFDLRPNELPTMP CCCCCEEEEEECCEEEECCCCCCCCCCCEECCCCCEEEECCCCCEEEEEEECCCCCCCCC H C >Mature Secondary Structure MIDIRKAQHRGTANHGWLHSRHTFSFGHYRDANQQGFSDLLVINDDRVAPSKGFGTHGHR CCCCCCHHCCCCCCCCEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC DMEIFSYVLDGALQHKDSMGTGSVIRPGDVQMMSAGSGVQHSEFNHSPEEPVHFLQIWIV HHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE PNKVGVQPRYQQVHFTEADKRGRLRQIISPEGTNGSLAVHQDARVYAGLFDGDESADLAV CCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEE GANRNVYVHVARGSVEVNGERLDEGDGARIRNAGDLHFAKGEDAEVLVFDLRPNELPTMP CCCCCEEEEEECCEEEECCCCCCCCCCCEECCCCCEEEECCCCCEEEEEEECCCCCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]