| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609440
Identifier: 120609440
GI number: 120609440
Start: 797837
End: 798814
Strand: Direct
Name: 120609440
Synonym: Aave_0744
Alternate gene names: NA
Gene position: 797837-798814 (Clockwise)
Preceding gene: 120609439
Following gene: 120609441
Centisome position: 14.91
GC content: 72.19
Gene sequence:
>978_bases ATGCACCGCAGAACCCTGCTGGGCAGCGCCGCCGCCGCGGCCGCCCTGGCCGTCCAGCCCTGGGCGCGCGCCCAGGCCGA CTACCCCGCCCAGCCCATCCGCTGGGTCGTGCCCTATCCGGCCGGCGGCGGCACAGACGTGCTCGCGCGCACCGTGGCCG AGGCGCTGCGCACGCCGCTGGGCCAGCAGATCGTGGTGGACAACCGCCCCGGCGCCTCCACCAACATCGGCGCGCAACTG GTCGCCACCGCCAAGCCCGACGGCTACACGCTGATGTCGGCCGACAACGCTCTGCTGGCCTACAACGAGCACCTGTTCAG CAAGCTGCCGTTCAGTCCCGACAAGGACTTCACCTACATCGGCGGCCTCTCGCGCTTCCCCCTCGCGCTGGTGGTGCATC CGGGTTTCGAGGCGCGCACCTTCCAGGAATTCATCGCCTATGCGCGCGCCAACCCGGGCAAGCTCAGCTACGCATCGCCC GGCAATGGATCGCCCCACCACCTGGCGATGGAGATGTTCAAGAACCGCACCAGGACCTTCCTGACCCACATCCCCTACCG CGGCGCGGCCCCGGCGCTGCAGGACGTGATGGGCGGCCAGGTGCCGTGCATGTTCCTCGACCTGGCGGCCGGCCTGCCGG TGATCCAGTCGGGCAAGGTGCGCGCGCTCGCCATCGGCTCCGGCCGCCGAGCCGCCAGCCTGCCCCAGCTGCCCACGCTC GCCGAAGTGGGCGTGCCCGATGCCGAGGTCTATGCGTTCCAGGGCGTGCTCGGCCCCGCGGGCCTGCCCCCGGCCGTCGT CGCCCGCCTGAGCGGCGAGATCAACAAGGCCCTGGCCGCGCCCACCGTCGTCCAGCGCATGCAGGATTTCGGGATGGAGG CGCTGCCCGGCACGCCCGAGCAGTTCCGCGCCATGGCGCGCGGCGAGGCCAAGCGCTGGGGGCCGATCATCCAGGCGGCC GGCGTGAAGCTGGACTGA
Upstream 100 bases:
>100_bases CCTGCCGACGCTGCTGGCCCGCGAGGGCTTCCGGGTCGAGCGCGTGGAATGGCCCGCGCGGCCCTGATTTTCGAGTGAAG ACAACAACAGGAGACAACAC
Downstream 100 bases:
>100_bases GCGGCTGAGCGGCTGAGCGGCTGAGCGGCTGAGCGGCTGCGCGGCGGCGCGGCGGCGCTGTAGGCCGGCGCCGCGAACGC GGCGCCATGGGTGCGTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MHRRTLLGSAAAAAALAVQPWARAQADYPAQPIRWVVPYPAGGGTDVLARTVAEALRTPLGQQIVVDNRPGASTNIGAQL VATAKPDGYTLMSADNALLAYNEHLFSKLPFSPDKDFTYIGGLSRFPLALVVHPGFEARTFQEFIAYARANPGKLSYASP GNGSPHHLAMEMFKNRTRTFLTHIPYRGAAPALQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGSGRRAASLPQLPTL AEVGVPDAEVYAFQGVLGPAGLPPAVVARLSGEINKALAAPTVVQRMQDFGMEALPGTPEQFRAMARGEAKRWGPIIQAA GVKLD
Sequences:
>Translated_325_residues MHRRTLLGSAAAAAALAVQPWARAQADYPAQPIRWVVPYPAGGGTDVLARTVAEALRTPLGQQIVVDNRPGASTNIGAQL VATAKPDGYTLMSADNALLAYNEHLFSKLPFSPDKDFTYIGGLSRFPLALVVHPGFEARTFQEFIAYARANPGKLSYASP GNGSPHHLAMEMFKNRTRTFLTHIPYRGAAPALQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGSGRRAASLPQLPTL AEVGVPDAEVYAFQGVLGPAGLPPAVVARLSGEINKALAAPTVVQRMQDFGMEALPGTPEQFRAMARGEAKRWGPIIQAA GVKLD >Mature_325_residues MHRRTLLGSAAAAAALAVQPWARAQADYPAQPIRWVVPYPAGGGTDVLARTVAEALRTPLGQQIVVDNRPGASTNIGAQL VATAKPDGYTLMSADNALLAYNEHLFSKLPFSPDKDFTYIGGLSRFPLALVVHPGFEARTFQEFIAYARANPGKLSYASP GNGSPHHLAMEMFKNRTRTFLTHIPYRGAAPALQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGSGRRAASLPQLPTL AEVGVPDAEVYAFQGVLGPAGLPPAVVARLSGEINKALAAPTVVQRMQDFGMEALPGTPEQFRAMARGEAKRWGPIIQAA GVKLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34410; Mature: 34410
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRTLLGSAAAAAALAVQPWARAQADYPAQPIRWVVPYPAGGGTDVLARTVAEALRTPL CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC GQQIVVDNRPGASTNIGAQLVATAKPDGYTLMSADNALLAYNEHLFSKLPFSPDKDFTYI CCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEECHHHHHHCCCCCCCCEEEE GGLSRFPLALVVHPGFEARTFQEFIAYARANPGKLSYASPGNGSPHHLAMEMFKNRTRTF CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH LTHIPYRGAAPALQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGSGRRAASLPQLPTL HHCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCCCH AEVGVPDAEVYAFQGVLGPAGLPPAVVARLSGEINKALAAPTVVQRMQDFGMEALPGTPE HHCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QFRAMARGEAKRWGPIIQAAGVKLD HHHHHHHCCHHHHCCHHHHCCCCCC >Mature Secondary Structure MHRRTLLGSAAAAAALAVQPWARAQADYPAQPIRWVVPYPAGGGTDVLARTVAEALRTPL CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC GQQIVVDNRPGASTNIGAQLVATAKPDGYTLMSADNALLAYNEHLFSKLPFSPDKDFTYI CCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEECHHHHHHCCCCCCCCEEEE GGLSRFPLALVVHPGFEARTFQEFIAYARANPGKLSYASPGNGSPHHLAMEMFKNRTRTF CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH LTHIPYRGAAPALQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGSGRRAASLPQLPTL HHCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCCCH AEVGVPDAEVYAFQGVLGPAGLPPAVVARLSGEINKALAAPTVVQRMQDFGMEALPGTPE HHCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QFRAMARGEAKRWGPIIQAAGVKLD HHHHHHHCCHHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]